Ictalurus punctatus (channel catfish): 108274127
Help
Entry
108274127 CDS
T04658
Symbol
stx4
Name
(RefSeq) syntaxin-4
KO
K13502
syntaxin 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108274127 (stx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108274127 (stx4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108274127 (stx4)
Membrane trafficking [BR:
ipu04131
]
SNARE
Syntaxin (Qa)
Stx-PM
108274127 (stx4)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108274127 (stx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Osteoregulin
FlxA
DUF6262
Syntaxin_2
TFR_dimer
Lzipper-MIP1
DUF7121
COG5_N
DUF1798
POTRA
Zn_ribbon_3CxxC
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
108274127
NCBI-ProteinID:
XP_017339522
Ensembl:
ENSIPUG00000000613
UniProt:
W5U5L7
LinkDB
All DBs
Position
13:13308171..13318055
Genome browser
AA seq
297 aa
AA seq
DB search
MRDRTKELGNPADGSDEDEEGTALMFKPGTGTSVKEDRDNEGFFRKVHEIREGLESLKKK
VSELENKQKSVLSEALPKESMKKELQTIRDEIKVLATQIQKKLKSIEPKKIDEDGKYVPI
NLRMQRTQHAVLSRNFIESMSYCNTIQSQYRDRNVERIQRQLKITGNNVTDEQLEAMLES
GQTDVFTQNILTDAQATRQALNEIESRHDEILKLEKSIRDLHDMFQYLAMEVEAQGEMVD
RIENNIINSSNYVEKAVEDTGAAVVSRNKARKKKMWIAVCIAILVLIIAIALAVSFS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaccgaaccaaagaattgggaaatcctgcagatggctcggatgaagacgaggaa
ggcacagcactcatgttcaaaccaggtacagggacctccgtaaaggaggacagagacaat
gagggtttctttcggaaggtccatgagattcgagaggggcttgaatctcttaagaagaaa
gtgtctgaactggaaaacaaacagaaatctgttttaagtgaagcacttccgaaggaaagt
atgaaaaaggaacttcagacaataagagatgagatcaaagtattagctacccaaatccag
aagaagctgaagagtattgaacccaagaaaattgacgaagatgggaaatatgttccaata
aacttaagaatgcaaagaacacagcatgctgtcctgtcccggaattttattgagtcgatg
agttactgtaacacaattcaatcccagtacagggatagaaatgtggagaggatacaaagg
caactcaaaatcactggcaataatgtgactgatgaacagctggaggcaatgcttgagagt
ggacagacagatgtgttcacacaaaatatcttaacagatgcccaagccacccggcaggca
ctaaatgagattgagtcacggcatgatgagattcttaaactggagaaaagcatcagagat
cttcatgacatgtttcagtatcttgccatggaagtggaggcacaaggggaaatggttgat
cgtatagagaacaacataattaactcttctaactatgtagagaaggctgtcgaagacaca
ggggcagctgttgtctctcgaaacaaagccagaaagaaaaaaatgtggattgcagtgtgc
attgcaattttagttttgataatagccattgccctggctgttagtttcagctga
DBGET
integrated database retrieval system
