Ictalurus punctatus (channel catfish): 108274134
Help
Entry
108274134 CDS
T04658
Symbol
psmd11b
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 11B
KO
K03036
26S proteasome regulatory subunit N6
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
108274134 (psmd11b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ipu03051
]
108274134 (psmd11b)
Proteasome [BR:
ipu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
108274134 (psmd11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN6_N
PCI
RPN6_C_helix
TPR_ESP1
TPR_12
Csm6_6H
TPR_3
Motif
Other DBs
NCBI-GeneID:
108274134
NCBI-ProteinID:
XP_017339532
Ensembl:
ENSIPUG00000018634
UniProt:
W5UDG9
LinkDB
All DBs
Position
13:complement(14105973..14113376)
Genome browser
AA seq
422 aa
AA seq
DB search
MAAAAVVEFQRAQSLISTDRDASIDILHSIVRRDVQQDDEEAVRVKEQSILELGTLLAKT
GQAAELGGLLKFVRPFLISISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKAE
KRTFLRQALEARLISLYFDTKRYQEALQLGSQLLQELKKMDDKALLVEVQLLESKTYHAL
SNLPKARAALTSARTTANAIYCPPKLQAALDMQSGIIHAAEEKDWKTAYSYFFEAFEGYD
SIDSPRAITALKYMLLCKIMLNLPEEVQALISGKLALRYAGRQTDALKCVAQASKNRSLA
DFEKALTEYTKELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQITHISDLIKLSKGD
VERKLSQMILDKKFHGILDQGEGVLIIFEEPPVDKTYEAALETIQNMSKVVDSLYNKAKK
LT
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgcggcagtggttgagtttcagagagctcagtctcttattagtacggatcga
gacgcttctatcgatattttacattctatagtcaggcgagatgttcagcaggatgatgaa
gaggcggtgcgtgtcaaagagcagagcatcctggagctcggcactctcctggctaagaca
ggacaagctgcagagcttggagggctcctgaagtttgtcagacctttcctgatctccata
agcaaggcaaaggcggcacgactggtgcgctctctgttggatctttttctggatatggag
gcagccacggggcaggaggttgagctatgtctagagtgcattgagtgggccaaagctgag
aagaggacgttcctccgacaggctcttgaggctcgtttgatctcactttatttcgacact
aagaggtaccaggaggctttgcagttgggctcccagttactccaggagctgaagaaaatg
gatgacaaagctttacttgtggaagtccagttgcttgagagtaaaacctatcatgcgctc
agtaacctgcccaaggccagagctgccctcacctctgccaggaccacagccaatgccatc
tactgtccacccaaacttcaggcagctttggacatgcagtcaggcattatccatgctgct
gaagagaaggattggaagaccgcgtattcttacttctttgaggcttttgaaggttacgat
tccatcgacagccccagggccatcactgcgctgaaatacatgcttctctgcaaaatcatg
ctcaatttgccggaggaagtccaagccttgatcagtggcaaactggccttgcgttatgct
gggagacaaacagacgcactaaagtgtgtagcgcaagccagcaagaacagatcattagca
gactttgaaaaggcgcttactgagtacacaaaagagctgagagatgatccaatcatcagc
acacacctggccaaactctatgataacttgttggagcagaaccttatccgggtcattgag
cccttctccagagtacagataacacatatatcagatctcatcaaactctcaaagggtgat
gttgagagaaagctgtcgcaaatgatcctggacaagaagtttcatggcatccttgaccaa
ggtgagggagtcctgatcatatttgaggagcctcctgttgataagacctatgaggcagcc
ctcgaaaccatccagaacatgagcaaagttgtggactcactgtacaacaaagctaagaag
ttgacatag
DBGET
integrated database retrieval system
