Ictalurus punctatus (channel catfish): 108274192
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Entry
108274192 CDS
T04658
Symbol
socs5a
Name
(RefSeq) suppressor of cytokine signaling 5a
KO
K04698
suppressor of cytokine signaling 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108274192 (socs5a)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
108274192 (socs5a)
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Gene cluster
GFIT
Motif
Pfam:
SH2
SOCS_box
SOCS
Motif
Other DBs
NCBI-GeneID:
108274192
NCBI-ProteinID:
XP_017339682
UniProt:
W5U7P4
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Position
13:complement(20358443..20379540)
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AA seq
520 aa
AA seq
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MEKVGKVWNNLKRGCQSLLHQDGSSRGETEPQTHTFCQSVDQTQGESTPELANLSTHPVV
SRRVNGSVIHRGHNCVAEVPHILEITVEQDSEDGCPPLGARRDSYSRHAPWSGKKRHSCS
TKAQSSLETADRRSGRSRRRHLANGSRDEPDPGLPRSLRQQLHETMGLCLPLRLSSRGTH
SRVPKRKIQITELMLETCPFPPGSDLARKWHLIKQHTAPVTTTAVDCSTDSPNAACASPE
DEEERLRERRRLSIEEGVDPPPDAQIHTVETITAPLATVYKLGPKLAPGTGEALGESRGA
TAADCDSEDDDTTTLCLQARRPKQRHNSAEGLLGGKQPGPWKVHTQIDYIHCLVPDLMQI
TALPCYWGVMDRYEAEALLDGRPEGTFLLRDSAQEDYLFSVSFRRYGRSLHARIEQWNHN
FSFDAHDPCVFHAATVTALLEHYKDPSACMFFEPLLTLPLHRTSPFGLQTLARAVICRGT
TYDGIAALPLPPVLQDYLREYHYKQRVRVRWLERELLKAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtaggcaaggtgtggaacaacctaaagaggggatgtcagtctctgctccac
caagatggaagttcccgtggggaaacggaaccacagacacatacgttttgtcagagtgtg
gaccagacccagggagagagcacaccggaactcgccaacctgtcaacacatcctgtagtg
tcacggagggttaatggcagcgtgatacaccggggtcataactgcgtggcagaagtgcct
cacatactggagatcacagttgagcaggacagtgaagatgggtgccctcctctgggtgcc
cgcagagactcctattcacgtcacgcaccttggagtggcaagaagaggcactcatgctct
accaaggcacagagttccctggagaccgcagaccgacggagtggccgctcccgccggaga
cacctagcaaatggcagcagggatgaaccagacccaggactaccacgctcactgcgccag
cagctccatgaaacaatgggcctgtgcctccctctgcgtctgtcatcacgcggcacccac
tcacgggtgcccaagcgcaagatccagatcaccgagctaatgctggaaacatgccccttc
cctcctggctctgatcttgctcgtaaatggcacctcatcaaacagcatacagcccctgtt
acaactacagcagtggattgctccacggactcccctaatgctgcttgtgcatccccagag
gatgaggaagaacgtctacgtgaacgacgaaggctcagtatagaagagggagtggatcca
cctcctgatgctcagatacacaccgtagagactattacagctccattggctacagtctac
aagctgggacctaaactagcccctgggacaggggaggccttgggtgagagccggggagcc
acggcagccgactgtgactctgaagatgatgacaccaccactctttgtttgcaggcccgc
cgtcccaagcagcgccataattcagcagagggcctcttggggggaaagcagccagggccc
tggaaagtgcacacacagattgactacatacactgcctagtgccagacctgatgcagatc
acagctctaccttgctactggggtgtaatggaccgctacgaggctgaagcactgctcgac
ggccggcctgagggcacctttctgctgcgcgactctgcccaggaggactatctgttttcc
gttagttttcgtcgttatggtcgctcgttgcatgcacgtattgaacagtggaaccacaac
ttcagctttgatgcccacgacccctgtgtgttccatgcagccacagtcacagcgctgctg
gagcactacaaggaccccagcgcctgcatgttcttcgagcctctgctcactttgcccctt
caccggacttctccatttggcctgcagaccctggctcgggccgtcatctgccgtgggacc
acctacgacggcattgcagcactacctttacccccagtgctgcaagactacctcagggag
tatcattacaagcaaagggtgcgggtgcgctggctggagcgagagctgctcaaggccaag
tga
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