Ictalurus punctatus (channel catfish): 108274196
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Entry
108274196 CDS
T04658
Symbol
tom1l2
Name
(RefSeq) TOM1-like protein 2 isoform X1
KO
K26401
target of Myb membrane trafficking protein 1 and related proteins
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108274196 (tom1l2)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
108274196 (tom1l2)
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
108274196 (tom1l2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
GAT
ENTH
Motif
Other DBs
NCBI-GeneID:
108274196
NCBI-ProteinID:
XP_017339687
Ensembl:
ENSIPUG00000002497
UniProt:
A0A2D0SAC8
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All DBs
Position
13:complement(12316589..12336479)
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AA seq
520 aa
AA seq
DB search
MEFLLGNPYGTPVGQCIEKATDGSLQSEDWTLNMEICDLINETEDGPKDAIRAVKKRLNG
NKNYREVMLTLTVLETCVKNCGYRFHALVTTRDFIDGVLVKVISPKNNPPAIVQDKVLAL
IQAWADAFRSSPDLTGVVHVYEEMKRKGIEFPRSDLETLSPIHTPQRLQSTSEVDPKPSA
PAQPKPAHAYSAPPVQSPPQVPNMHMAGPINPTLDQISRLRSELDIVRGNTKVMSEMLTE
MVPGQEDPSDHELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNIFLRYER
YERFRSGRAGHGVNNGVLSEATDDNLIDLGPGSPAVVSPRISGTPPSSLPASVAPARSAS
PATLSSRLAGLDVGAESVSGTLSSLSRCQPLSDDFDMFAQTRSGTLNDQRKNPPFEDTQA
ASGAAPTLELRQQNSGGFALAQSSVMDDIEEWLCTDVKGDEGEEGVTSEEFDKFLEERAK
AAEMVPTLPLTLSADPTSTAGSAVNAGKKPDRPEDSTFVL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggagttcttgttgggaaatccatacggtactccggtgggacagtgcattgaaaaagcc
acagatggctccttacagagtgaagactggactttaaacatggagatatgtgacctcatt
aatgaaacagaggatgggcctaaggatgccataagggctgtcaagaagagacttaatgga
aataagaattacagagaagtgatgctgaccttgactgttctcgagacatgtgtgaagaac
tgtggttatcgcttccatgctctcgtcactacccgggactttattgatggagttctggtt
aaggtcatttcgcctaaaaacaaccccccagccatcgtacaggacaaagtacttgccctt
atacaggcttgggctgatgctttcaggagtagtccggatttgacaggtgtggtgcatgtc
tatgaggaaatgaagagaaaaggcatagagttcccaaggtcagacctggagaccttatca
cctatccacacaccacagcggttgcagagtacctcagaggtggatcccaaacccagtgct
ccagcacagccaaaacctgcccatgcatactctgctcctcctgtccaaagcccacctcag
gttccaaacatgcacatggctggacccatcaaccccaccttggaccagatttctaggttg
cgcagtgagctggatattgtgcgtgggaacaccaaggtgatgtctgagatgttaacagaa
atggtgcccggccaagaggatccatctgaccatgagcttctgcaggagctgaacagaacc
tgcagggccatgcagcagaggatagtagagctcatctctcgtgtgtccaacgaggaggtc
acggaggaactgctccatgtcaatgacgacctcaacaacatatttttgcgatatgagaga
tatgagaggttccggtctggtcgagctggtcatggtgtcaataatggggtcctgagtgag
gccacggatgacaatctgattgaccttgggccaggttctcctgcagtggtgagccccagg
atcagtggcactcctccctccagcctgccggcttcagtagctcctgctcgctctgcttca
cctgccacactctcctctcgactggcaggcctggatgtaggtgctgaaagtgtcagtggc
actctgagttctctaagtcgctgtcagccactgtcagatgactttgacatgtttgcccag
accaggagcggtaccctgaatgaccaaaggaagaatccaccttttgaagacacacaggct
gcaagtggagccgctcctactctcgagcttagacaacagaactctggagggttcgctctt
gcccagtcctctgtcatggatgacattgaggaatggctctgtactgatgtgaaaggagat
gaaggagaagaaggcgtgacgagtgaagaatttgataagtttttggaggagagggctaaa
gctgcagaaatggtccccacacttccactgacgctgagtgcagatcccaccagcacagct
ggctcagctgtaaatgctgggaaaaagcctgatcgacctgaagactccacgtttgtcctc
tag
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