KEGG   Ictalurus punctatus (channel catfish): 108274231
Entry
108274231         CDS       T04658                                 
Symbol
tob1b
Name
(RefSeq) protein Tob1b
  KO
K14443  protein Tob/BTG
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108274231 (tob1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    108274231 (tob1b)
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108274231 (tob1b)
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     108274231 (tob1b)
SSDB
Motif
Pfam: BTG PAM2 T2SSM SinI Ig_GEX2_N
Other DBs
NCBI-GeneID: 108274231
NCBI-ProteinID: XP_017339744
Ensembl: ENSIPUG00000005837
UniProt: A0A2D0SAJ1
LinkDB
Position
13:10154582..10158130
AA seq 369 aa
MIEKTSFVLWREKSASCSPQTDHLLPRRFLQRSAHEGTHACNWEAAMQLEIQVALNFIIS
YLYNKLPRRRVNIFGEELERQLKKKYEGHWYPDKPYKGSGFRCIHVGEKVDTVVEEAAKE
SGIDIEDIRNNLPQDLSVWIDPFEVSYQIGEKGSIKVLYVDDTGENGSELDKEIRNSFNP
DAQVFMPISDPVGVSSESSSPSPPFGQSASVSPSFMPRSTQPLTFTTATFAATKFGSTKM
KNGSRSGSKVARTSPTNLGLNVTSLLKHKAISNSMHSLYGLGLGGQPKASALSPNAKEFV
FPNLQSQGSSTTMFSNENPLSLSPLQYNNAFDVFAAYGSLNDKSLMDGLNFSLSNMQYSN
QQFQPVMAN
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgatagagaagacttcctttgtcctgtggagggagaaatcagcgtcctgttcgccacaa
actgatcacttactgcctaggaggtttttgcaacgctcggctcacgaaggcacacacgct
tgcaactgggaagcagctatgcagcttgaaatccaagtagcactcaacttcataatatcc
tacctgtacaacaaactccctcgacgtcgggtgaacatcttcggggaagagctcgaacgg
cagttgaaaaagaaatatgaagggcactggtaccccgacaagccatacaaagggtccggg
ttcaggtgtatacatgtcggggagaaggtcgacacggtagtggaagaagcagccaaagag
agcgggattgacatcgaagacattcggaacaacttgcctcaggacctcagtgtgtggatc
gacccgtttgaggtgtcctaccagattggggagaagggatccattaaggtgctttacgtg
gatgataccggcgagaacgggtcagagttggacaaggagatcaggaacagttttaacccc
gatgctcaggtcttcatgccaatcagcgatcctgtaggggtctcctctgagtctagctcc
ccgtcaccaccgtttggtcagtctgcttctgtcagcccgtcattcatgccacgctccact
caacctttaactttcaccacagccacgttcgccgccaccaagttcggctccaccaaaatg
aagaacggcagccgcagtggtagcaaggtggcacgcacatctcccaccaacctgggcctg
aatgtgaccagcctactgaagcataaagccatttccaattccatgcattctctctacggt
cttggtctcggagggcagccgaaggcttccgcgctctctcctaacgccaaggagtttgtt
ttccctaaccttcagagccagggcagctccaccacgatgttcagcaacgagaatccgctc
agcctcagccctctgcagtacaacaatgccttcgacgtgtttgcagcctacgggagcctc
aacgacaagtctctcatggatggtctaaacttcagcctaagcaacatgcagtattctaac
cagcaattccagccagtcatggctaactaa

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