Ictalurus punctatus (channel catfish): 108274261
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Entry
108274261 CDS
T04658
Name
(RefSeq) ribonuclease P protein subunit p30
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108274261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108274261
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108274261
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108274261
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
108274261
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
108274261
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
108274261
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
108274261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_P_p30
Motif
Other DBs
NCBI-GeneID:
108274261
NCBI-ProteinID:
XP_017339815
Ensembl:
ENSIPUG00000003863
UniProt:
A0A2D0SC56
LinkDB
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Position
13:complement(11651997..11660283)
Genome browser
AA seq
269 aa
AA seq
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MSVYMDLNIIAISDKKRLQNIIETAAHLGYSTVAINYVVEPQQKKQQIPKPLSASELCEK
LPIVQGKSRPIKVLNRLTVVATEASHFRPSSEYKNFDILAVYPKTEKLFHAACMTYDVDI
ISIATTEKQPFYCKRSPVNGAIERGVFFEISYTAAIRDSTMKKYTIANAINLVDVCKGKN
VILTSGVENPLELRGPYDIANLGLVFGLSEGDAKAAVSTNCRSVILHGETRMTALGIIHM
MMKKKKSQPPIEQPEEETPAVKRAKTETL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtatatatggatttaaacataatcgccatcagcgacaagaaaaggctgcaaaac
attatagagacagctgctcaccttggttactccacagttgcaataaattatgtagtggaa
ccccagcagaagaagcagcaaattcctaagccattgtctgcttcagagttgtgtgagaaa
ctccccatagtacagggtaaatccagaccaattaaagtgctgaaccggttgacggtggtg
gccacagaagcctctcactttaggccgtccagtgaatacaagaactttgacattttggcc
gtgtatcccaaaactgagaaactcttccatgctgcctgcatgacatatgacgtggacatc
atctccatagcaacgactgaaaaacagcctttctattgcaaaaggtcaccagtaaatggg
gcaatcgaaaggggggtgttttttgagataagctacacagcggccatcagagactccacc
atgaagaaatacacaatcgcaaatgccatcaacctagtggatgtgtgcaagggaaagaat
gtcattctgacgagtggagtggagaatccccttgagttacgtggaccatatgacatcgcc
aatcttgggctagtgttcggtctctctgaaggggacgcgaaagctgcagtctccacaaac
tgccgatccgttatactgcatggagagacccgtatgacagcgttgggtattattcacatg
atgatgaagaagaagaagagccaaccacccatcgagcagccagaggaagaaactccagct
gtaaagagggccaaaactgaaacactttag
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