Ictalurus punctatus (channel catfish): 108274280
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Entry
108274280 CDS
T04658
Symbol
zfp36l2
Name
(RefSeq) mRNA decay activator protein ZFP36L2 isoform X2
KO
K18753
butyrate response factor
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
108274280 (zfp36l2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108274280 (zfp36l2)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108274280 (zfp36l2)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tis11B_N
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Zn_finger_prot
Torus
Motif
Other DBs
NCBI-GeneID:
108274280
NCBI-ProteinID:
XP_017339848
Ensembl:
ENSIPUG00000008010
UniProt:
A0A2D0SAT7
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All DBs
Position
13:complement(20573417..20576472)
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AA seq
378 aa
AA seq
DB search
MSTSVLSSIYDFDLLYRQEKSQGSNAMHLNNVLDRRTVGIPLSTSNKNNNRFNAGGYFRA
NSISHMDSISGGKESPTPAYMNKENKFRDRAFSETGERGQELQEMLQPKPGSQINSTRYK
TELCRPFEENGSCKYGEKCQFAHGYHELRNLSRHPKYKTEPCRTFHTIGFCPYGPRCHFI
HNVDERRAAPNTQQRLQRGECALPTDKESAPFFTHKDRPRLHHSLSFSGFSSSHSAMIES
PTSRTPPPPPTSCALSFFEDSLAPSPHCLNAFGIPEQDLKAFLAPLIPHAQSAFSGQASY
GPQTSPPFPVSSLAPLRLISDSPPVFDSPPSPLDSLSDPESFVSGSRCSSGTISGSESPS
LDSNRRLPIFSRLSISDD
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacttcagtactatcttccatttacgacttcgacctgttgtacaggcaggagaaa
agccaaggctctaatgcaatgcacctgaacaacgtgttggataggagaaccgtggggatc
ccgctctccacctccaataaaaacaataacaggttcaacgcgggcggctacttccgggct
aactccatcagccacatggactccatcagcggtggcaaggagagccctacaccagcatat
atgaataaggagaacaagtttcgcgaccgcgcctttagcgagacaggggaacgtggtcaa
gagctgcaggaaatgctccagcccaagcccggctctcagatcaactccacccgctataaa
accgagctgtgcaggcctttcgaggaaaacggttcctgcaagtacggcgagaagtgccag
tttgcgcacggctatcacgaactgcgcaatctttcccgccatcccaagtacaagaccgag
ccatgccgcacctttcacaccataggtttctgtccatacggcccgcgctgccacttcatc
cacaacgtcgacgagcgcagagccgcgccgaatacacagcagagactccagcgaggcgag
tgcgcgctcccgaccgacaaggagtccgctccgtttttcacgcacaaggacagacccagg
ttgcaccacagcctgagtttctcgggtttctcaagctctcacagtgccatgatcgagagc
cctacgtctcgcacgccgccgccgccgcccacctcctgcgcactctcgttcttcgaggac
tcactggctccgagtccacactgcttaaacgcctttgggatccccgaacaggacctcaaa
gctttcctcgcccctttaatcccgcacgcccaaagtgctttcagtgggcaggcctcgtac
gggccgcaaacgtcgcctccgttcccagtgagctcgttagcgccactgcgccttatctcc
gactccccgccggtgtttgactccccaccaagccctctggactccctctcggacccggag
agcttcgtcagcggctcccgctgctcgtccggcacgatcagtggctccgagtcgcccagc
ttggattcaaacagacgcctgccaattttcagcaggctgtccatctcagacgactga
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