Ictalurus punctatus (channel catfish): 108274285
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Entry
108274285 CDS
T04658
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108274285
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
108274285
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Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_17
TPR_1
TPR_14
TPR_19
TPR_11
TPR_12
TPR_CcmH_CycH
RMD1-3
TPR_16
CFAP70_mid_TPR
TPR_8
TPR_10
TPR_Psidin_N
CFAP70_TPR_C
TPR_MalT
TPR_7
TPR_20
TPR_SusR
HAT_Syf1_CNRKL1_C
DUF2526
ANAPC3
TTC22_N
Motif
Other DBs
NCBI-GeneID:
108274285
NCBI-ProteinID:
XP_017339855
UniProt:
A0A2D0SC95
LinkDB
All DBs
Position
13:complement(11715394..11717245)
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AA seq
341 aa
AA seq
DB search
MKCFNECESYLEKLRSIAQNFPESALGHHPEVLGEKAWAFFKFSRKYYNQAKECFEKALE
LEPMNAEWNCGYAFVLHRLETKSSGVTDSPTVKQLRRALDTNSENDELKAILAVKLAQTT
EYDEGERLMEEALEGSPNAPNVIRYVGKFLRTYGDVERSIALLKRALEKSPASAFIHHQL
ALCYKRKTTSLQREGSQNSHSSGAEIQRLRSQCIYHLDKATELKPGFIIAMTELAIQYSE
DGKLDRAEEMFQQTLQTAEEKNEGQQQVYLSYAQFLQYRRRDLPEAITYYMECLKIDEDT
INGQKSAKHLNKINDRRSSKSPGSGRAQRTFVRKEERNAGP
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgctttaatgaatgtgagagttacctggagaagcttagaagtattgcacagaat
ttccccgagtctgctttgggtcatcatcctgaagtgcttggagaaaaggcctgggccttc
ttcaagttctctcgcaagtactacaaccaggctaaagagtgctttgagaaggctttggag
ctagagcccatgaatgctgagtggaattgtggttatgcctttgttctccacagactagaa
acaaagtcctccggtgtaaccgactctccaacagttaaacaactgcggcgggccttagac
acaaattcggaaaatgatgagcttaaagccatcctagcagtcaagcttgctcagaccacg
gagtacgatgaaggggagagattaatggaagaagctctggagggttctccaaatgctcct
aatgtcattcgatatgtgggtaaatttttgaggacctatggtgatgtagagaggtccatc
gcccttctaaaaagagctttagagaagtcacccgcatctgctttcatacaccatcagctg
gctctctgctacaagagaaaaacaacttctttgcaacgtgaaggaagtcaaaactctcat
agttctggtgctgagattcagaggcttcgcagtcagtgcatttatcatttagacaaggcg
acagaactgaaacctggctttattatagctatgactgagctggcaattcagtacagcgag
gatgggaaacttgatcgtgcggaagagatgtttcagcaaactctccagacagctgaagag
aaaaatgaaggccaacaacaagtgtatctgagttatgcacagtttctgcagtacagaagg
agagacctacccgaagccatcacttattacatggaatgtctgaagatagacgaagacaca
ataaatgggcagaaaagtgctaaacatctgaacaagattaatgatagacgttcatctaaa
agccctgggagtggaagagctcagaggacctttgtaaggaaagaggagagaaatgcaggg
ccgtag
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