Ictalurus punctatus (channel catfish): 108274290
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Entry
108274290 CDS
T04658
Name
(RefSeq) pre-mRNA splicing regulator USH1G
KO
K21878
Usher syndrome type-1G protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108274290
Cilium and associated proteins [BR:
ipu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
108274290
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_4
Ank
Ank_2
Ank_3
Ank_5
SAM_1
Motif
Other DBs
NCBI-GeneID:
108274290
NCBI-ProteinID:
XP_053541239
Ensembl:
ENSIPUG00000001552
UniProt:
A0A9F7RDZ4
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Position
13:28959379..28966033
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AA seq
468 aa
AA seq
DB search
MSVHPFSATLRVPTWRSGTPASAKHLLQVPSSVAGPIYSPREERCCELSPTAARGEPDKC
DIWGNTPLHLAAANGHLDCLSFLVSFGANVWCLDNDYHTPLDMAAMRGHMDTVRYLDSVA
AKQSTLNPKLVRKLKERAFHNAEQRIKHCAELQHENQRRMEKKFLKETVDSGASGSVRFS
VSYGRKIPQFNTVNSSISYTQATLNSKGRTKFPKCLKKKQADDTFKISEDGRKSVRSLSG
LQLGNDVMFLKQQTYANPRHRLHVRNMFPQNPNDLCDDDEDDDVAVVSHAVSDPGLYNDP
GQRSLFSRPGLGTLVFRRNYGSDGVQEDDSYSVEGQVSSWREQNIHFREGICLGRPSLDQ
DTISNRLLKAFLWDCDDGNDDDDDDEVEYDGLQHCSSPLEVFLVSQGLGEFLFLFVKEQM
DLEALMLCSEPNLCIINVPLGPRKKLLEACSRRRHTLQRARAMCDTQL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtacacccgttcagtgcaaccctgcgagtcccaacctggcgatcgggtactcct
gctagtgctaaacatctcctgcaagttcctagctcggtggcagggcccatatacagtcct
cgagaagagaggtgctgtgaactatcgcctacagcagcccgcggtgaaccggataagtgt
gatatctggggaaacactcctcttcacctggccgcagccaacggccacctcgactgcctt
tccttcctcgtgtcattcggtgccaatgtgtggtgtttagacaatgactaccatacgccg
ctggacatggccgccatgcgaggacacatggacaccgtgcggtatctggactctgtcgct
gccaagcagagcaccctcaaccccaagctggtgaggaagctgaaggagcgagcattccat
aacgcagagcaacgcattaaacactgcgcagaactgcagcacgaaaaccagcggcgcatg
gagaaaaaattcctgaaagagactgtggattcgggcgcatccgggtccgtgagattctcc
gtgagctatggccgcaaaatcccacaattcaacactgttaactccagcatcagctacaca
caggccacgctgaactccaaaggtaggacaaagttcccaaagtgtctgaagaagaagcag
gctgatgacacctttaagatctctgaagatggaaggaaaagtgtgcgctccctttctggg
cttcagctggggaacgacgtgatgttcctgaagcagcagacgtacgcaaaccctcgccac
cgactccacgttcgcaacatgttccctcaaaacccgaatgatttatgtgacgatgacgag
gatgatgatgtggccgtggtttctcatgcagtgagtgatccaggtttgtataatgacccg
ggacagcgctctctattctcccggcctggtctcgggactcttgttttccgacggaattac
ggcagtgatggagttcaggaagatgattcgtacagtgttgaaggtcaggtgtcatcatgg
agagaacagaatattcatttcagagagggcatatgtctcggacgtcccagcctggatcag
gacaccatcagcaacagactcttaaaggcttttctgtgggattgcgatgatgggaatgat
gatgatgatgatgatgaagtagagtatgatggtctgcagcattgctcctctcctctggag
gtgttcttggtgtcccagggtttaggtgagttcctgttccttttcgtgaaggagcaaatg
gacctggaagctctgatgctgtgctccgagcctaacttgtgcatcatcaacgttccactc
ggacccaggaagaagcttctggaagcctgcagtcggcgcagacacactctgcagcgagcc
agggccatgtgtgacacgcagctctga
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