Ictalurus punctatus (channel catfish): 108274307
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Entry
108274307 CDS
T04658
Name
(RefSeq) alanyl-tRNA editing protein Aarsd1
KO
K07050
misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108274307
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Trans-editing factors
108274307
Prokaryotic type
108274307
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_SAD
tRNA-synt_2c
Exo70_N
Motif
Other DBs
NCBI-GeneID:
108274307
NCBI-ProteinID:
XP_017339893
Ensembl:
ENSIPUG00000010672
UniProt:
A0A2D0SAY0
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Position
13:complement(7800374..7813829)
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AA seq
413 aa
AA seq
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MAFQCQRDSYMKEFVTSVVSCSPAELKLDSNNGKKEKVKGFNVILKDTILFPEGGGQPDD
HGLIEDLAVVRVLRQGTEAVHFTSSALEEGREVRLKVDWERRFDHMQQHSAQHLITALAD
TMFGYKTTSWELGRQRSSIELDAASVKPGEMEALEDAVNDRIRAHVPVNVHLLSIDDPDV
EKARSRGLPDDHAGPIRIIDIEGVDANMCCGTHVSNLSHLQVIKILGTEKGKKNKTNLIF
IAGNRVLKYSEKCYNTEKSLTSLLKTGPDEHVDAVDKLQKTVRRLQKSNLTILRDMAVLI
AQNFKSQPERGNFFSLHNKDGDNEFMNIIANEIGFQDTIIFLTVGEEKGAGLFLLAGPEN
LVTEVGPRVVQLLQGKGAGKNGRFQGKANSLAKRAEVEALLQEHSRRRTAGEE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcttttcagtgtcagagggatagttatatgaaagaatttgtcacgtcggtggtgtcc
tgttcgcctgccgaactgaaactggatagcaacaacggcaagaaagaaaaagtgaagggc
tttaatgtgatactaaaagacacaattctgttccccgagggaggcggacagcctgatgac
catggactcatcgaggatctggctgtggtgcgagtgttgagacagggaacagaggcagtg
cacttcaccagctcagctttagaagaaggccgtgaggttcggctcaaggtggactgggag
cgtaggtttgatcacatgcagcagcattcagcccaacatctgatcactgctttggcggac
acaatgtttggatataaaactacctcatgggagttgggccgtcagcgcagcagtatcgag
ctggatgcggcctctgtgaagccgggagagatggaggcattggaggatgcggtcaatgac
aggatccgtgctcatgtcccagtcaatgtgcacctcctctctatagatgaccctgatgtt
gagaaggcaaggagcagagggcttcctgatgatcatgctggaccaatcaggatcattgat
attgagggagtagatgccaatatgtgttgtgggacccacgtgtccaatctcagtcatcta
caggtgattaagattctagggacagagaaagggaagaagaataagaccaacttaattttc
atagccggaaacagagtcctgaaatactcagagaaatgctacaacacagaaaagtcactg
acgtcgctgctgaaaacaggaccagatgagcatgttgatgccgtggacaaattgcagaaa
actgtcaggcgccttcagaagagtaacctcactatcctcagggacatggctgttcttata
gcacagaacttcaagagccagccagagagaggcaacttcttcagtttgcacaacaaggat
ggtgacaatgagttcatgaacatcattgccaatgagattggctttcaggacacaatcatt
tttctgacggtgggggaagagaaaggagcaggactgtttctccttgcagggcctgagaat
ctcgtaactgaagttgggccacgagtagtgcagctgctacagggaaaaggtgcaggaaag
aacggccgtttccaaggcaaggccaacagcctggcgaagagagccgaggtggaggctttg
ctgcaggagcacagccgccggcgcactgcaggagaggagtga
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