Ictalurus punctatus (channel catfish): 108274340
Help
Entry
108274340 CDS
T04658
Symbol
rangap1b
Name
(RefSeq) ran GTPase-activating protein 1b
KO
K14319
Ran GTPase-activating protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108274340 (rangap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108274340 (rangap1b)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108274340 (rangap1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
BSP_II
Motif
Other DBs
NCBI-GeneID:
108274340
NCBI-ProteinID:
XP_017339949
Ensembl:
ENSIPUG00000000910
UniProt:
A0A2D0SB39
LinkDB
All DBs
Position
13:13085130..13093535
Genome browser
AA seq
564 aa
AA seq
DB search
MASGDIDQLTEALAKTHVGEELSYKGQGLKLNDKQSVEEIAQAIEQFQGLKALRLEGNTL
GVEAAQAISKALESKKDLQRCYWSDMFTGRLRSEIPSALKSLGSALMISGAKLTELDLSD
NAFGPDGVKGIEALLKSAVCYTLQELRLNNCGMGIGGGTILASALTECYKQSSAAGSPLK
LKVFVAGRNRLENDGATALSQAFQLIGSLEEIHMPQNGINHPGITDLATAVQHNPNLRVI
NLNDNTFTKKGAVAMAQALRHLCNVQVINFGDCLVRSEGAIAITAALRGLPDLKELNLSF
GEISEAAALVVARAIRDKAELDKLDLNGNCLGEDGCEALKEAMESMGMGDVLCSLSDDEG
EEDEDDDDDEEDGEDEDTEEKVEDEQNCINGLKDEGSPRKVPLGSAEFLSFFQSPTSENL
LNLGAKRVQLFEQQVDFSDAAKIADIFLQLSSVYKEDADVKQVVFEIADALLKKALSNPQ
FQTYSFTCSLLVKAGLLKGEKKAKKVCVLPGHLLTLKHCVEQEYFPVDQANVLEVFVSRN
GKVLASCSSARDDLKATLEKRISA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggagatattgatcagcttacagaggctctggccaagactcatgtaggggaa
gagctcagctacaagggtcaaggactgaagctgaatgataaacagtcagtggaagagata
gcacaagcgatagaacagttccagggtttgaaggcattgcggcttgaaggaaatactctt
ggtgttgaagcagcgcaggctatttcaaaggctcttgagtccaaaaaggatctgcagcga
tgctactggagtgacatgtttacgggtcgccttcgctctgaaattccatctgccttgaaa
tcactgggcagtgccttgatgatctctggggccaagcttactgaactggacttgagtgac
aatgcgtttggaccagatggtgtaaagggcattgaggccctcctcaagagtgctgtgtgc
tacactctacaggaactcaggctgaataattgtggcatgggcattggaggaggcacaatc
ctggcctctgcactgactgaatgctacaagcaatcaagtgctgccggctcacctctaaag
ctaaaagtctttgtagcaggacgtaatcgacttgagaatgatggcgccactgcactttcc
caagcatttcagttaattggaagccttgaggagattcacatgccacagaatggtatcaac
cacccaggcatcacagatttggccactgcagtgcaacacaatcccaatctgcgtgtgatt
aacctcaatgacaatacctttaccaagaagggtgcggtagccatggcccaggccctcagg
cacttgtgcaatgtacaggttattaattttggagactgtctggtgcgctctgaaggtgcc
attgctataacagcagcactaagaggactgcctgatcttaaggagctgaacctgtcattt
ggagagatttcagaagctgcagctctggttgttgcccgggctatacgggacaaagctgaa
ctggacaaactagacctcaatggaaactgcctgggggaagatggttgtgaagctctgaaa
gaggccatggaaagtatgggcatgggggatgtgctttgttcactcagtgatgatgaaggg
gaagaggacgaggatgatgatgatgatgaggaagatggtgaagatgaggatacagaggaa
aaggtggaagatgagcagaactgtatcaatgggctaaaagatgaaggaagcccaagaaag
gtgccattaggcagtgctgagttcttgtccttctttcagtctccaacttcagagaacctt
cttaaccttggtgccaagagagttcagctctttgagcaacaagtggatttctcagatgct
gctaaaattgcagacatttttcttcagctatcttcagtgtataaagaagacgcagatgtg
aagcaagttgtttttgagattgctgatgccctgttgaagaaggcgctttccaaccctcag
tttcagacctatagttttacctgttcactgttggtgaaagcggggcttttaaagggtgag
aagaaggccaagaaagtttgtgtcttgcctggtcacctacttactctgaagcactgtgtt
gagcaagaatacttccctgtggaccaggccaatgttctagaggtctttgtgtctcgaaat
ggcaaagttttggcgtcatgttccagtgctagagatgaccttaaagccacactggagaaa
aggatctctgcctag
DBGET
integrated database retrieval system
