Ictalurus punctatus (channel catfish): 108274346
Help
Entry
108274346 CDS
T04658
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03440
Homologous recombination
ipu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108274346
03460 Fanconi anemia pathway
108274346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108274346
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108274346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
Motif
Other DBs
NCBI-GeneID:
108274346
NCBI-ProteinID:
XP_017339955
Ensembl:
ENSIPUG00000003807
UniProt:
A0A2D0SCI4
LinkDB
All DBs
Position
13:complement(26337279..26345271)
Genome browser
AA seq
516 aa
AA seq
DB search
MGSSSRAGFHIGDSDSSDSERLPVIDFSQKPKTSVCSDSSDSAMTHPVSARPAGGSVFTV
SSDSEEEEEAFVPLAVRLKQKAVAKSKCESQKSCVNQNGGLKEKISTAQCVKVSEDNPGA
GRRYGKEPVSVRDEDVGLRKRKRTLEDVEGSREEALRRKVERERQHGERERMRAEKKALT
DAVKAMKPEECIKHMVVVVDPGLLQLEGGGDLLTSLHTMGCSCAIEKQPMPRSVSWVRRT
PCPQTGEVMSIPEALAVLQVPVDDFVSMVHTSTQAPRSGGPSERGVTLTAWVLRLMARNA
DRTLSVSVIDIEKYFKSRSAKGRRRFRDAVLGDETKKRKRKDAEQLPDVSRVEVEECLVD
LQLHTGVQVHFHSTWKDFTNYVTMSTKAVAEAPFKRERDKTGFSFCLESEWAGGQKVERT
GKGLLQVWKRQIQQLNRVSADMATAILGAYPSPQLLIQAYRRCGSDREKAALLSDVLIRR
GEGVTSTTRRIGPELSKRIFLSMTSSDPQQTLDSVS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggggagcagcagtcgagcgggatttcatatcggtgacagcgactccagcgactcggag
aggctccccgtgatcgatttctcccaaaaaccaaagacttcggtgtgttcagactcctcg
gactctgcgatgactcatccggtctctgctcggcctgctgggggaagcgtcttcacggtc
agcagtgacagcgaggaggaggaagaggctttcgttcctctggctgtaagactgaaacag
aaagctgtagctaagagcaaatgcgagagtcagaagtcgtgtgtgaatcagaacggaggc
ttgaaggagaagatctcaactgcgcagtgtgttaaagtttcagaggataatccaggtgct
gggaggcgttatggtaaagagcctgtctccgtcagggacgaggacgtcgggctacgaaag
cgcaaacgcaccctggaggacgtggaggggagcagagaggaggcgctgcgcaggaaagtc
gagcgggagaggcagcacggagagagagagcggatgagagcggagaagaaagcgctgacg
gatgctgtgaaggccatgaaaccggaggagtgcattaaacacatggtggtggtggtagat
cctggcctgctgcagctggagggtggtggtgatctcctgacctcactgcacacgatggga
tgcagctgtgccattgagaagcagccgatgccacggagtgtgtcctgggttagacgcaca
ccctgtcctcagactggagaagtgatgtctatcccagaagcccttgcggtgctccaggtc
ccggtggatgacttcgtcagcatggttcacacttccacacaggcgccgaggagtggagga
ccgagcgaacgtggcgtaaccctcaccgcctgggttctccgtcttatggcgagaaacgca
gacaggaccctcagtgtgtcggtgatcgacatagagaaatatttcaagagtcggagcgct
aagggacggcggaggtttcgggatgcggtgctgggggacgagacgaagaagaggaagagg
aaggacgcggagcagcttcctgatgtctcgcgggtggaggtggaggagtgtttagtcgac
ctccagctgcacacgggggtccaagtccattttcactcgacctggaaggacttcactaat
tacgttaccatgtcgaccaaggcagtagctgaagcaccgttcaagcgggagcgagacaag
accggcttcagtttttgtctggagagcgagtgggcaggtggtcagaaggttgagcgaaca
gggaaaggacttctgcaggtgtggaagaggcagatccagcagctgaaccgggtcagcgca
gacatggctacggccatcctcggcgcctatccgtctcctcagcttcttattcaggcgtac
aggcggtgcggatcggaccgggaaaaagccgcgctgctgtcggacgtgctgatccgccgc
ggagaaggagtgacgtcgacgacgcgcaggatcggtccagagctctccaagcggatcttt
ctttcgatgacgtcatcagacccccagcagaccctggattccgtgtcataa
DBGET
integrated database retrieval system
