Ictalurus punctatus (channel catfish): 108274352
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Entry
108274352 CDS
T04658
Symbol
si:ch211-176g6.2
Name
(RefSeq) ras-associating and dilute domain-containing protein isoform X1
KO
K26418
Ras-associating and dilute domain-containing protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108274352 (si:ch211-176g6.2)
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GFIT
Motif
Pfam:
DIL
RA
PDZ
PDZ_6
PDZ_2
FHA
Motif
Other DBs
NCBI-GeneID:
108274352
NCBI-ProteinID:
XP_017339970
Ensembl:
ENSIPUG00000005784
UniProt:
A0A2D0SCJ8
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All DBs
Position
13:10278026..10307291
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AA seq
1157 aa
AA seq
DB search
MTMTWGERTLRRTGTAPPSPAAAPISAAKRSLSKLSRKHSNGSVQSSSSAGTAMSVEGVG
FRQPAKSRIRRHQHRLSSVFSRGVLSARADIVTAGEEPSVTDDPSELSSHITAPGILKIF
GTEICEGANYKSVLATTHSSAKELVKEALERYSLNKADADAYVLCDVIGCIREREWRSEC
VRVVGDNERPLLLQSLWKPREGYARRFEIQSRVSVEEKISRDKDTVTAGINAQARKLQKT
RSRGRSVVFNGGGRGIATDIGLSLCRSLSEADLRPSPEPQQSLKSQSGGEDLEAYKELPC
AAGRKEETESSDDNCTQYSIHPPEHFPYFLLLQGFSYRQDFIIYSLNSSCTVFGHHSEQS
DGVKERPAVGVTLWAPDIQPQHCCIQRVQVTTSDLQQDDRKGPGVTVLKPLHGALVKRNG
DVVNQEVELHSGDVIGLGENYLFMFKDPNTEILGKSPSVAPPWRHDSPQPHPPTSFPLYQ
RCMLSMSEGSGTPCAAESTMPCLRDTNGQELILFYDVEHETRVLEEIFTKVDRHEDLHKL
TPSFLMCLCLQQSATHFPMTDLRRLLLHIANKVQIAVLERAKELAAIQSEMDGIDPVDLQ
PENLLRSLQPLVLWMANSIELLHFIHQEVPCLLHGISRMEEEEEEDCMAVLELRLSTVRP
ASEEAMTVLEEVIMFTFQQCVYYLTKLLYPVLPGLLDSNPFSENGQVQIPDEVASVLDIL
TKTLKLIKDFNIHPEISIQLFTYLFFFVNAFLFNLLMERGSGGSFYHWSCGVQIRANLDV
LIDWAYTAGLGELAQSHLVKLSSAVNLLATTREHLLQASWGSLRTEFSLLSPAQLHHMLR
EYNPRRPCPSAWTPCSADADAACRTADILESFDDHPPLVLPIDGFQMNFKKPIRDTRLIE
ELVQLQAVIKALNVGASTAQCAHRESAVPLEAKRTKMDVFPKAHLEQGHTLLMLPKNCDS
STCSSVSGDEGVCEVVLTQKIKALDLQDKETNHNSKTKHLALETSCLLTPPNTPLSSESR
TECQDMQSHHHTPQSCDTTKHEEGGCGRHGVGDDDVFVVELLKGPGGLGLSLVDGVVRTL
ETPMKMNGIYIKSVSPGSPAALSQRLRPGDRLLAVNGHRLVGLDYHTGRELIQKAGDQTQ
LLVARSERIREDTVPNR
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgacgtggggtgagcggacgttaaggagaacaggaaccgcacctccgtcacct
gcagcagcaccgatcagcgcagccaagaggagcctatccaagctcagccgcaagcacagc
aatggatctgtccaatctagctcatcggctggtactgccatgtctgtggagggcgtgggc
ttcaggcaaccagccaagagcagaatccgccgacatcagcaccgcctttcctctgtgttc
agccgtggtgtgctctcggctcgtgcggacatagttacagctggagaagagccatcagta
acagacgatccctcagaactgtccagtcacataacggcaccaggtatcctgaagattttt
ggcaccgagatatgcgaaggtgccaactataagagcgtcctggctacaacccactccagt
gccaaagagctggtgaaagaagcactcgagagatactctctgaacaaagcggatgctgat
gcctacgtcctttgtgatgttatcggctgcatcagagaacgagaatggaggagcgagtgt
gtgcgtgtggtgggagataacgagcggccgctgctcctgcagtcgctctggaagcccaga
gaaggctacgcacggcgctttgaaatccagagtagagtcagcgtggaagagaagatctcc
agagacaaggatacagtgactgcagggatcaacgctcaggctcgtaaactgcagaagacg
cgctcacgggggaggtctgtggtgttcaacggaggcgggcgtggcattgccactgatatt
gggctgagtctgtgtaggagtctcagtgaagcagatctcaggccctcccctgagccccag
cagagccttaagagccaatcgggtggagaggacttggaggcctacaaagagctgccctgt
gcagctggcagaaaagaagagacggagagcagcgatgacaactgcacacagtattccatt
cacccacccgaacacttcccttacttcctgctactgcagggcttcagttacagacaggac
ttcatcatctattctctaaatagcagctgtacagtgtttggccatcattctgagcaatct
gatggagtgaaagagcggccagctgtaggtgtgactctttgggctcctgacatccaacca
cagcactgctgcattcagagagtccaggtcacaacttctgaccttcagcaagatgatagg
aaaggaccaggagtcacagttctgaagccgttacatggagcattggtcaagaggaacgga
gatgttgtcaaccaagaggtggagcttcattcgggagatgtcataggcttgggcgagaat
tacctcttcatgtttaaggatcccaacactgaaattttgggaaaatcccctagtgtagct
cctccatggcgacatgactcaccacaacctcatcctccgacatcatttcctctctatcag
agatgtatgttatctatgtcagagggctcaggaacaccctgcgctgcagaaagcaccatg
ccctgcctgagggacacaaacggacaagagctcatcctcttttatgacgtagagcacgaa
acacgggtcctagaggagatatttacaaaggtagaccgtcatgaagacctgcacaagctc
accccatctttcctgatgtgtttatgcctccagcaatcagccacacattttcccatgacc
gacctgcgacgacttctgctacatatcgccaataaggttcaaatagctgtattggaaagg
gcgaaggagcttgcagctattcagtctgaaatggacggcattgacccagtggatctgcag
ccggagaaccttctcagaagtctgcagccgcttgttctgtggatggccaactccatagaa
ctcctccatttcatccatcaagaagtgccttgcttgttgcatgggatttcacgaatggag
gaggaggaggaggaagattgcatggctgtgttggagctgcgcttgtctacggtgcgtcct
gccagcgaggaggccatgacggtcctggaggaggtcattatgtttaccttccagcagtgt
gtctattacctcaccaagctcctgtacccagtcctcccaggcctgttagacagtaatcct
ttctcagagaatgggcaggtacagatccctgatgaagttgccagcgtgttggacatctta
acaaagacactgaagctcatcaaagacttcaacatacaccctgaaatttccatacagctc
ttcacttacctcttcttctttgtcaatgccttcctcttcaacctgctcatggagagagga
tcagggggaagcttttaccactggtcctgtggagttcagatccgtgcaaatttggatgtg
ctgatagactgggcttacacggcagggctcggagagctggcacagagccacctcgtcaaa
ctctcctccgctgtcaatctgctggccaccactcgagaacatctgctgcaggcatcatgg
ggttctttgaggacagagttttccttacttagccctgctcagcttcaccacatgctgagg
gagtacaacccacgccggccctgcccctctgcatggacgccctgcagcgccgacgccgac
gcagcatgccgaactgctgatatccttgaaagctttgatgaccacccgcctcttgtcctg
cccatcgatggctttcagatgaactttaaaaagcctattagagatacaaggctcattgaa
gaactcgtgcagcttcaggcagtcatcaaggcacttaatgttggagcatcaactgcacaa
tgtgctcaccgtgaatccgccgtacccctggaagccaaacgcaccaaaatggacgttttt
ccaaaagcccatctggaacaaggacacacactattgatgctgcctaagaactgtgattct
tccacttgttcttcagtatcaggtgacgagggcgtgtgtgaagttgtgcttacccaaaag
ataaaggctctggatctacaggacaaagagacgaaccacaacagcaaaactaagcactta
gcactggaaacctcgtgcttgctcaccccacctaacacaccactgagctcagagtccagg
accgaatgccaggatatgcagtcccaccatcacactccccagagctgtgatacaaccaag
catgaggaaggaggatgtggaaggcatggagtcggcgatgatgacgtgtttgtggtggag
ctgttgaagggccctggaggattaggactgtctctagtggatggggtggtgagaactttg
gaaacaccaatgaagatgaatgggatctatattaaatctgtgagcccagggtctcctgca
gctctgagtcagagactgcggccaggcgatcgacttctggcagtcaatggccacagattg
gttggcttggactaccatactggcagggagctcattcagaaggctggagaccaaactcag
ttgctagttgcccggtctgaaagaattcgcgaagacacagtgccaaatcgctga
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