Ictalurus punctatus (channel catfish): 108274409
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Entry
108274409 CDS
T04658
Symbol
ntn2
Name
(RefSeq) netrin 2 isoform X2
KO
K06843
netrin 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108274409 (ntn2)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
108274409 (ntn2)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
NTR
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
108274409
NCBI-ProteinID:
XP_017340029
Ensembl:
ENSIPUG00000005515
UniProt:
W5UDQ5
LinkDB
All DBs
Position
1:38609980..38635005
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AA seq
575 aa
AA seq
DB search
MKDICELLLVCWLVGVASMIPDTTAHDTNPFSAQASSTDPCYSESGSARYCIPEFVNAAF
GQEVTVSSTCGRRNCEHTYLTDLNSAQNLTCWQSEMLRSMPFNVTLTLSLGKKFEITYIS
LHFCSEKPDSMAIYKSMDYGRSWTPFQFYSSQCRRVYDRPNRAEITKLNEQEPLCMEMPN
SADSSNAILVFSTLDGRPSRTNFVSSPVLQDWITVTDIRVTFNRPKMNKDMREPAYFYAM
SDFQVGGRCKCNGHAHRCMRDKDGMMVCDCKHNTEGSECDRCKPFHYDRPWQRATPKDAN
ECLPCNCNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGYYRDMSRPIT
HRKACTACDCHPVGAAGKTCNQTSGQCQCKDGVTGLTCNRCAKGYQQSRSPVAPCIKIPA
IHPTAIVSSTEGPADCESYCKPAKGNLKINTKKYCKKDYAVLVSVLDMETVGDWAKFSVS
LVSVYKSREPLKRGENTLWVHMKDLACKCPRIHMGKRFLILGSGGVGASAERVGLTADKN
SLVIQWRDIWTRRLRKFQRREKKGKCSAAEHNPEA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacatttgtgagcttctattggtctgttggttggtgggagtggcttcaatgatt
ccagacaccacagcccacgatacaaaccccttctctgcgcaagcatcatccactgacccc
tgctacagcgaatcaggttccgcccgctactgtattccagagttcgttaacgcagcattc
ggtcaggaagtgaccgtatcgagcacctgtggccgtcgcaactgtgagcacacctacctg
acagatctaaactctgcccagaacctcacctgctggcagtcggagatgcttcggtccatg
ccgtttaacgtcacactgacactttcactaggaaagaaatttgaaatcacttacattagt
ttacatttctgttctgagaaaccggattccatggctatttataaaagcatggactatgga
cgtagctggacaccatttcaattttattcttctcagtgccggcgtgtttatgatcgcccg
aacagggcggaaatcaccaaactcaatgagcaggagccactgtgcatggaaatgcccaac
agtgctgactccagcaatgccatcctcgtgttcagtactctggatggacgaccttcaaga
acaaactttgtctccagccctgttctccaggattggatcactgttactgacatacgtgta
acatttaaccgcccgaaaatgaacaaagacatgcgagaacccgcctacttttatgcaatg
tcagatttccaggtgggcggcagatgtaagtgtaatggccatgcccacagatgtatgagg
gacaaagatgggatgatggtctgtgactgcaaacacaacacggaaggatccgagtgcgac
cgatgcaaaccgttccactatgatcgtccatggcagcgtgccacgcccaaagacgctaac
gagtgtctgccatgtaactgtaatctacatgcacggcgctgcaggtttaacatggagttg
tataagttatcaggacgaaagagtggaggcgtgtgtatgaactgcagacacaacacagct
ggacgacactgtcactactgcaaagagggctactacagagacatgagccgaccaatcaca
caccgcaaagcctgcacagcttgtgactgccacccggtgggagctgcaggtaagacgtgt
aatcagacatctggtcagtgtcagtgtaaagacggagtgactggtctcacctgtaatcgt
tgcgctaaaggctaccagcagagccgctcacctgtagccccctgcatcaagattcctgct
attcatccaacagcaatagtgagcagtacagaaggacctgcagactgcgagtcctactgc
aaaccagccaagggcaacctgaagatcaacacaaagaaatactgcaagaaagactatgcc
gtcctggtgagtgtgttggacatggagactgtgggtgactgggcaaagttctccgtcagc
ttggtgtcagtgtataagagccgagagccactgaagagaggcgaaaacacgctgtgggtg
cacatgaaggatttggcgtgtaaatgtccacgcattcacatggggaaacgcttcctcatc
ctgggatcgggcggggtcggtgccagtgcagagagggtggggcttaccgcagataaaaac
agcctggtcatacagtggagagacatctggactcgacgcctgcgcaagttccagcgcagg
gagaaaaagggaaaatgcagtgctgcggaacacaaccctgaagcctga
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