Ictalurus punctatus (channel catfish): 108274413
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Entry
108274413 CDS
T04658
Symbol
ush1ga
Name
(RefSeq) pre-mRNA splicing regulator USH1G isoform X2
KO
K21878
Usher syndrome type-1G protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
108274413 (ush1ga)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108274413 (ush1ga)
Cilium and associated proteins [BR:
ipu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
108274413 (ush1ga)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_5
Ank_3
SAM_1
SAM_2
SAM_7
Motif
Other DBs
NCBI-GeneID:
108274413
NCBI-ProteinID:
XP_017340044
Ensembl:
ENSIPUG00000010382
UniProt:
A0A2D0SBD2
W5UIR3
LinkDB
All DBs
Position
2:complement(23733083..23747518)
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AA seq
473 aa
AA seq
DB search
MNDKYHRAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLDALRLIVARGGNPDK
CDIWGNTPLHLAASNGHLNCLSFLVSFGANTWCLDNDYHTPLDMAATKSHMDCVRYLDSI
AAKQTALNPKMVAKMKDRAFRDAERRIKDCVKMQRKHHRRMERKFQKEATDASFSDAMSF
SSYTSSTFSRKLHPFNTATSVPYSQATLHATARGKTKIQKKLEKKKQGDGTFKIYEDGRK
SVRSLSGLQLGNDVMFLKQGTYVTSKDRGRRNIRDMFPRDNEDAISRAISEPDLHGADMD
HSEISTDSGHDSLFNRPGLGTMVFRRNYVSGGLFGIGSRDEGSMASIGRAPNVRLRSRLQ
RSPSVDEDSIGSARSLQARNMEELPWDEVEIGLDDDDEPESSPLEVFLAAHCMNEFISIF
KREKIDLDALLLCSDNDLKSIHIPLGPRKKIIEACKRRLDTIDDPDSIEDTQL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaagtaccacagggcagcgcgagatggctacctggacctgctgaaagaggcc
acgcggaaggacctgaacgcgccagatgaagatggcatgacaccgacgctctgggccgcg
taccacggcaacctggacgcgctcagactcattgtggcgagaggagggaatcctgacaag
tgtgacatatgggggaacacaccactccacctggctgcttccaatggccatctcaactgc
ctatccttcctggtgtcctttggtgcaaacacatggtgtctagacaatgactaccacacg
cctctggacatggctgccaccaagagccacatggactgtgtacgatacctggactccata
gctgccaagcagacagctcttaatcccaagatggtggcgaagatgaaagacagagccttc
cgtgatgccgaacgtcgcatcaaagactgtgtcaagatgcagcgcaagcaccaccgccgc
atggagcgcaagttccagaaagaagccacagatgcttcgttttctgatgccatgagcttc
tccagctacaccagcagcacttttagccgcaaactgcaccccttcaacactgccaccagt
gtgccatactcacaggctactctccatgccacagccagaggcaaaaccaaaatccagaag
aagttggaaaaaaagaagcagggtgatgggaccttcaagatctatgaggatggaaggaag
agtgtgcgctctctttctgggctacagctgggtaatgatgtcatgttcctaaagcagggt
acctacgtaacctcaaaagaccgtggtcggcgaaacatccgtgatatgttcccacgggac
aatgaagatgccatctcacgtgccattagcgagccagacctgcatggagcagacatggac
cactcagagatcagcactgactcgggccatgactcacttttcaaccggcctggcctgggt
accatggtcttccggaggaactatgtgagtgggggactctttggcataggctctcgtgat
gagggcagcatggccagcattgggagggcaccaaatgtccgtctacgcagtcgtcttcag
cgatcccccagtgtagatgaggatagtatcggcagtgctcgaagccttcaggcaaggaac
atggaggagcttccctgggatgaggtggaaataggactggatgatgacgatgagccagag
agtagtccacttgaggtattcctggctgcccattgcatgaatgagttcatctctatcttt
aaacgagagaagattgacctggatgcgctgctgctgtgctctgacaatgacctcaaaagc
atccacattcctttgggaccccgtaaaaaaatcattgaggcatgcaagagacgcctggac
accattgatgatcccgacagcatagaagacacacagttatag
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integrated database retrieval system
