Ictalurus punctatus (channel catfish): 108274460
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Entry
108274460 CDS
T04658
Symbol
cdx1a
Name
(RefSeq) homeobox protein CDX-1a
KO
K09312
homeobox protein CDX1/4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108274460 (cdx1a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108274460 (cdx1a)
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GFIT
Motif
Pfam:
Homeodomain
Caudal_act
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108274460
NCBI-ProteinID:
XP_017340135
Ensembl:
ENSIPUG00000009477
UniProt:
A0A2D0SD10
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Position
14:complement(8032659..8048788)
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AA seq
329 aa
AA seq
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MKLFLCTAVTWTSEAATLLIKQLRYLPNTTSSAVWPTGELYQEGECLVKVKLAFAPRRLT
AGSGGHYAPDSQLARMSVSYLLERDGGAMYGNPTRHVNLGYSHQNVYPSPPYSDYTGYHH
VSAVGNEHHHGAQSGGAWNPVYAPAHDEWSLYAHGATHAPFPSLGPVNAGNVSGLVAPQE
QRSVPSVAGPPQLSPLSERDQAEWTRRAGPPSSTGGKTRTKDKYRVVYSDLQRLELEKEF
HFSRYITIRRKAELAVALNLSERQVKIWFQNRRAKERKLNRKKIQQSQQASTTTATPPAI
DIHANTAIVASASGSLLTDTLSTAIKEEY
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgttcctctgtacagctgtcacgtggacgtctgaagccgcaactctactcata
aagcagctcaggtacttaccaaacacgacgtcatcagctgtgtggccgacaggtgagctt
taccaggaaggtgagtgtttagttaaagtaaaactcgcctttgccccgcggcggctgaca
gcaggctccgggggccattatgcaccagacagtcagcttgccaggatgtccgtgagctac
ctgttggaaagggacggcggcgcgatgtacggtaaccccacgcggcacgtcaacctcggc
tacagccaccagaacgtgtacccgtcgccgccgtactcggactataccggctaccatcac
gtctcggccgtggggaacgagcaccatcacggagcccagagcggcggcgcgtggaatccc
gtttacgcgcctgcgcacgacgagtggtcgctgtacgcgcacggggccacgcacgcgccc
ttcccaagcctcggaccagtgaacgcggggaacgtcagcggcctggtggcgccacaggag
cagcgcagtgtaccgagtgtcgccggtcctcctcagctgtcccctctgtctgagagggac
caggccgagtggacgagacgcgcaggaccaccctcgagcacaggagggaagacgaggacg
aaggacaagtacagggtggtgtacagtgacctccagcgcctggagcttgagaaggaattc
cacttcagccgctacatcactatcaggcgaaaggctgagctcgctgtggctctcaacctc
tctgaacgccaggtaaagatctggtttcagaacagacgtgccaaagagaggaagctgaac
aggaagaagattcagcagtcgcagcaggcctccaccactacagccactccaccagccatt
gatatccatgcgaacactgctatagtcgcgagcgccagcggcagcttgttgacagatacg
ttatctacagctattaaagaagaatactaa
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