Ictalurus punctatus (channel catfish): 108274468
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Entry
108274468 CDS
T04658
Symbol
gabrb2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2a isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108274468 (gabrb2a)
04082 Neuroactive ligand signaling
108274468 (gabrb2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108274468 (gabrb2a)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108274468 (gabrb2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
108274468
NCBI-ProteinID:
XP_017340146
Ensembl:
ENSIPUG00000011129
UniProt:
A0A2D0SCE8
LinkDB
All DBs
Position
14:5185445..5252818
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AA seq
541 aa
AA seq
DB search
MRGARCLPSAWSTRNNNNKKIIIEIIAMDRMRKSQCIFLICPFIMTAVCAQSRDPSNMPV
VKDTVDRLMKGYDIRLRPDFGGAPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKR
LSYSEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT
TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGEGAVSGVERIELPQFSIVDY
KLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV
ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGQGP
QRQKKAAEKAATANNEKLRPDPNKWMVGNVVQRDDALYARMKQREIDVYDSMWDPIFADD
AALGLGEQRLKMNPDDIRLTTVEMKNEMGPGDLSRGLGDPRGAMLSYDSSTLQYRRAALA
RHNYGTGALEKKKSRLRRRASQLKVNIPDLSDVNSIDKWSRMIFPTVFSFFNVVYWLYYV
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcgcgcgctgtcttccttcagcttggtccaccagaaataataataataaaaaa
ataataatcgaaattattgcaatggacaggatgaggaaatcgcagtgtatcttcttgata
tgtcctttcatcatgaccgctgtgtgcgcgcaaagcagagaccctagcaatatgcctgta
gtgaaagacacagtggacagactgatgaagggatacgatatccgactgaggccggatttt
ggaggggctccggtggcggttggcatgaatatagacatcgccagcatagacatggtgtcc
gaagtaaacatggactacacactgaccatgtatttccagcaggcatggcgggacaagcgt
ctctcatactcggagatccctctgaacctgacgctggacaaccgcgtggctgatcagctg
tgggtgcctgacacttactttctcaatgacaagaagtccttcgtgcacggcgtcacggtc
aagaaccgcatgattcgcctgcatcctgatggcaccgtgctgtatggattgaggatcacc
accacggcagcgtgtatgatggacctgagacgctacccattggatgagcagaactgcaca
ctggagattgagagctacggatataccacagatgatattgagttttactggagaggagga
gaaggagctgtgtctggagtggagcgaattgagctgccccagttctccatcgtggactac
aagctcatctcaaagaacgtagtgttttccacaggttcatacccgcgcctatcgctgagc
ttcaaactgaagaggaacattggctacttcattctgcagacctacatgccatccatcctg
atcaccattctgtcttgggtttccttctggatcaactacgatgcctctgctgcccgtgta
gccctaggtatcaccacggtgctgaccatgaccaccattaacacccacctgagagagact
cttcccaagatcccctacgtgaaagctatagacatgtacctgatgggctgcttcgtcttt
gtgttcctggccctgctcgagtatgcctttgtcaactacatcttctttggtcagggaccc
cagaggcagaagaaggcagctgagaaagctgccaccgccaacaacgagaaactacgaccc
gatccaaacaagtggatggtgggaaatgtagttcagagagacgatgctctgtatgccaga
atgaaacagagggaaattgacgtgtatgactcgatgtgggatccaatctttgccgacgat
gctgcattaggactaggcgagcagagacttaagatgaatccggatgatatccggctgacc
acagtagagatgaagaacgagatgggtcctggcgatctgtcccgtggtctgggcgaccca
cgaggtgccatgctgtcgtacgacagctccactctgcagtatcgacgggcagcgctggca
cgccacaactatggcaccggtgcactggagaagaagaagagtcgtctacgccgacgtgct
tctcagctcaaggtcaacatccctgacctgtctgatgtcaactccatcgacaagtggtcc
aggatgattttcccaaccgtcttctcattctttaatgtggtctactggctctactacgtc
cattaa
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