KEGG   Ictalurus punctatus (channel catfish): 108274542
Entry
108274542         CDS       T04658                                 
Name
(RefSeq) centromere protein F isoform X1
  KO
K19750  dynein axonemal assembly factor 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ipu03037]
    108274542
   04812 Cytoskeleton proteins [BR:ipu04812]
    108274542
Cilium and associated proteins [BR:ipu03037]
 Motile cilia and associated proteins
  Dynein assembly factors
   108274542
Cytoskeleton proteins [BR:ipu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     Dynein-related proteins
      108274542
SSDB
Motif
Pfam: LRR_4 LRR_9 LRR_8 CENP-F_leu_zip ATG17_like KASH_CCD GAS LRRFIP PKcGMP_CC LRR_6 Fez1 Rab_bind LRR_LRWD1
Other DBs
NCBI-GeneID: 108274542
NCBI-ProteinID: XP_017340243
Ensembl: ENSIPUG00000013454
UniProt: A0A2D0SBY4
LinkDB
Position
14:4167821..4177131
AA seq 807 aa
MNKFPSALGAGGEELPLRPLLYTAGAAATAADIYDYVKRGDGMKTTSDPEVTTEDPVCEE
ATEPALFHPTEVPQNQEGLAVMKEEEMKFVLQLEERVRELEEQLCEARSDDMESKGLAVM
KEEEMKFVLQLEERVRELEEQLCEARRDDMESKVSLAEAEEKHQKAEETIAQLEVEKSDL
KDQVEILRGTVHVMGNLLHAVEVEKSDLKDQVEIVRGTVQDMGSQLHVVEVEKSELKDQV
EILRGTVQDMRSLLHAVEVEKSDLKDQVETLRGIVQHMRSQLHAVELEKSDLKDQVETLR
GTVQDMGSQLHVVEVEKSELKDQVETLHGTVQEMRSLLHAVEVEKSELKDQVETLRGTVQ
HMGNLLHVVEVEKSELKDQVETLRGTVQVMENLLTEIHRECDKLMNELQVMNDEMKKRLI
RTEELLKVSLPEAEEKHQKAEETIAQLEVEKPDLTNQVESRQESVQHMEDLPTETHRISK
AFLRDICKQNKLYLTPSLNDMLPLHYKGISIIEGLEEYTSLRCLYLQGNAIRKLENLQNQ
TELRCLFIHQNLIHTLENLEPLTKLNTLNVSNNYIRVIQNISCLSELATFQISNNLLESV
SDLQELCHCPSIRVLDLSNNCLNDPEILTVLEKMPNLSVLNLMGNDVVRKIPDYRKSLIL
RLKQLQCLDDHPVFPKERAFAEAWAVGGMEGERKERDLWQTRERRKIEESLDALRLLEEN
TLERRRAREQQQQEENVSVSGTSETVEGQNVSGVDLEQTEQEQKEEEKEEEEEDIQVAIK
DLPDLDDLDAVNMETVPKEQILIEELN
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgaataagtttccgagtgcacttggcgctggtggagaggaacttccgctgcgccccctg
ctgtacacggccggagctgcagccaccgcagccgacatttacgattatgtgaaacgaggc
gatggaatgaaaacaacatcggaccccgaggtcacaactgaagacccagtgtgcgaagag
gccacggaaccggctctgttccaccccacagaggttcctcagaaccaggagggtttggca
gttatgaaggaggaagaaatgaagtttgtactccagctggaggagagagtgagggagctg
gaggaacaactctgtgaggcacgcagtgatgacatggaaagcaagggtttggcagttatg
aaggaggaagaaatgaagtttgtactccagctggaggagagagtgagggagctggaggaa
cagctctgtgaggcacgcagggatgacatggaaagcaaggtctccctggctgaagctgag
gagaaacaccagaaggctgaggagactattgctcagctggaggtggagaagtctgacctg
aaggaccaggtggagatactgcgtggaacagtgcacgtcatggggaacctgctccacgct
gttgaggtggagaagtctgacctgaaggaccaggtggagatagtgcgtggaacagtgcag
gacatgggtagccagctccatgttgttgaggtggagaagtctgaactgaaggaccaggtg
gagatactgcgtggaacagtgcaggacatgaggagcctgctccatgctgttgaggtggag
aagtctgacctgaaggaccaggtggagacactgcgtgggatagtgcagcacatgaggagc
cagctccatgctgtcgagttggagaagtctgacctgaaggaccaggtggagacactgcgt
ggaacagtgcaggacatggggagccagctccatgttgttgaggtggagaagtctgaactg
aaggaccaggtggagacactgcatggaacagtccaggagatgaggagcctgctccatgct
gttgaggtggagaagtctgaactgaaggatcaggtggagacactgcgtggaacagtgcag
cacatggggaacctgctccatgttgttgaggtggagaagtctgaactgaaagaccaggtg
gagacactgcgtggaacagtgcaggtcatggagaacctgctcactgagattcacagggag
tgtgacaagctaatgaatgagcttcaggtgatgaatgatgagatgaagaagaggctgata
cgcacagaggagttactgaaggtctccctgcctgaagctgaggagaaacaccagaaggct
gaggagaccatcgctcaactggaggtggagaagcctgacctgaccaaccaggtggagtca
cggcaagagagtgtgcagcacatggaggacctgccaactgagactcacaggatcagtaag
gcatttttaagggacatctgcaagcagaacaagctgtacctgacccctagcttaaacgac
atgctgcctctccactataaaggtatcagcataatcgagggtctggaggagtacaccagc
ctgcgctgtctctatctccagggcaatgcgatacggaaacttgagaacctgcagaaccag
acagaactgcgatgtcttttcatccaccagaacctcatccacacactcgagaacctggag
ccgctcaccaaactcaacacgctcaatgtgtcaaacaactatatcagggtcatccagaac
atctcctgcctgagcgagctggccacgttccagatttcaaataatctactggagagtgtg
agcgatttgcaggagctgtgtcactgcccctccatcagagtcctggacctgtcaaataac
tgcctcaacgacccagaaatcctcactgtactggagaagatgcccaatctgagcgtgtta
aacctgatgggtaacgacgtcgtcaggaaaattcctgactacaggaagtcgctaatcctt
cgtctgaagcagttgcagtgcctggacgaccatcccgtgtttcctaaggagagggccttt
gcagaggcttgggccgtgggaggtatggaaggagaacgtaaggaaagagatttatggcaa
acaagagaaaggaggaagattgaggagagtctggatgccttgagactccttgaagaaaac
acactggagcgaagacgagctcgagagcagcagcagcaggaggagaatgtcagtgtttca
ggaacgtccgagactgtagaaggtcagaacgtgtccggtgtagacctcgagcagaccgag
caagagcagaaggaggaggagaaggaggaggaggaggaggacatccaggtcgcaataaaa
gatctccctgatctggatgatctggatgccgtcaacatggaaacagtgccgaaggaacaa
atcctgattgaggagctgaactga

DBGET integrated database retrieval system