Ictalurus punctatus (channel catfish): 108274542
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Entry
108274542 CDS
T04658
Name
(RefSeq) centromere protein F isoform X1
KO
K19750
dynein axonemal assembly factor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108274542
04812 Cytoskeleton proteins [BR:
ipu04812
]
108274542
Cilium and associated proteins [BR:
ipu03037
]
Motile cilia and associated proteins
Dynein assembly factors
108274542
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
108274542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
CENP-F_leu_zip
ATG17_like
KASH_CCD
GAS
LRRFIP
PKcGMP_CC
LRR_6
Fez1
Rab_bind
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
108274542
NCBI-ProteinID:
XP_017340243
Ensembl:
ENSIPUG00000013454
UniProt:
A0A2D0SBY4
LinkDB
All DBs
Position
14:4167821..4177131
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AA seq
807 aa
AA seq
DB search
MNKFPSALGAGGEELPLRPLLYTAGAAATAADIYDYVKRGDGMKTTSDPEVTTEDPVCEE
ATEPALFHPTEVPQNQEGLAVMKEEEMKFVLQLEERVRELEEQLCEARSDDMESKGLAVM
KEEEMKFVLQLEERVRELEEQLCEARRDDMESKVSLAEAEEKHQKAEETIAQLEVEKSDL
KDQVEILRGTVHVMGNLLHAVEVEKSDLKDQVEIVRGTVQDMGSQLHVVEVEKSELKDQV
EILRGTVQDMRSLLHAVEVEKSDLKDQVETLRGIVQHMRSQLHAVELEKSDLKDQVETLR
GTVQDMGSQLHVVEVEKSELKDQVETLHGTVQEMRSLLHAVEVEKSELKDQVETLRGTVQ
HMGNLLHVVEVEKSELKDQVETLRGTVQVMENLLTEIHRECDKLMNELQVMNDEMKKRLI
RTEELLKVSLPEAEEKHQKAEETIAQLEVEKPDLTNQVESRQESVQHMEDLPTETHRISK
AFLRDICKQNKLYLTPSLNDMLPLHYKGISIIEGLEEYTSLRCLYLQGNAIRKLENLQNQ
TELRCLFIHQNLIHTLENLEPLTKLNTLNVSNNYIRVIQNISCLSELATFQISNNLLESV
SDLQELCHCPSIRVLDLSNNCLNDPEILTVLEKMPNLSVLNLMGNDVVRKIPDYRKSLIL
RLKQLQCLDDHPVFPKERAFAEAWAVGGMEGERKERDLWQTRERRKIEESLDALRLLEEN
TLERRRAREQQQQEENVSVSGTSETVEGQNVSGVDLEQTEQEQKEEEKEEEEEDIQVAIK
DLPDLDDLDAVNMETVPKEQILIEELN
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaataagtttccgagtgcacttggcgctggtggagaggaacttccgctgcgccccctg
ctgtacacggccggagctgcagccaccgcagccgacatttacgattatgtgaaacgaggc
gatggaatgaaaacaacatcggaccccgaggtcacaactgaagacccagtgtgcgaagag
gccacggaaccggctctgttccaccccacagaggttcctcagaaccaggagggtttggca
gttatgaaggaggaagaaatgaagtttgtactccagctggaggagagagtgagggagctg
gaggaacaactctgtgaggcacgcagtgatgacatggaaagcaagggtttggcagttatg
aaggaggaagaaatgaagtttgtactccagctggaggagagagtgagggagctggaggaa
cagctctgtgaggcacgcagggatgacatggaaagcaaggtctccctggctgaagctgag
gagaaacaccagaaggctgaggagactattgctcagctggaggtggagaagtctgacctg
aaggaccaggtggagatactgcgtggaacagtgcacgtcatggggaacctgctccacgct
gttgaggtggagaagtctgacctgaaggaccaggtggagatagtgcgtggaacagtgcag
gacatgggtagccagctccatgttgttgaggtggagaagtctgaactgaaggaccaggtg
gagatactgcgtggaacagtgcaggacatgaggagcctgctccatgctgttgaggtggag
aagtctgacctgaaggaccaggtggagacactgcgtgggatagtgcagcacatgaggagc
cagctccatgctgtcgagttggagaagtctgacctgaaggaccaggtggagacactgcgt
ggaacagtgcaggacatggggagccagctccatgttgttgaggtggagaagtctgaactg
aaggaccaggtggagacactgcatggaacagtccaggagatgaggagcctgctccatgct
gttgaggtggagaagtctgaactgaaggatcaggtggagacactgcgtggaacagtgcag
cacatggggaacctgctccatgttgttgaggtggagaagtctgaactgaaagaccaggtg
gagacactgcgtggaacagtgcaggtcatggagaacctgctcactgagattcacagggag
tgtgacaagctaatgaatgagcttcaggtgatgaatgatgagatgaagaagaggctgata
cgcacagaggagttactgaaggtctccctgcctgaagctgaggagaaacaccagaaggct
gaggagaccatcgctcaactggaggtggagaagcctgacctgaccaaccaggtggagtca
cggcaagagagtgtgcagcacatggaggacctgccaactgagactcacaggatcagtaag
gcatttttaagggacatctgcaagcagaacaagctgtacctgacccctagcttaaacgac
atgctgcctctccactataaaggtatcagcataatcgagggtctggaggagtacaccagc
ctgcgctgtctctatctccagggcaatgcgatacggaaacttgagaacctgcagaaccag
acagaactgcgatgtcttttcatccaccagaacctcatccacacactcgagaacctggag
ccgctcaccaaactcaacacgctcaatgtgtcaaacaactatatcagggtcatccagaac
atctcctgcctgagcgagctggccacgttccagatttcaaataatctactggagagtgtg
agcgatttgcaggagctgtgtcactgcccctccatcagagtcctggacctgtcaaataac
tgcctcaacgacccagaaatcctcactgtactggagaagatgcccaatctgagcgtgtta
aacctgatgggtaacgacgtcgtcaggaaaattcctgactacaggaagtcgctaatcctt
cgtctgaagcagttgcagtgcctggacgaccatcccgtgtttcctaaggagagggccttt
gcagaggcttgggccgtgggaggtatggaaggagaacgtaaggaaagagatttatggcaa
acaagagaaaggaggaagattgaggagagtctggatgccttgagactccttgaagaaaac
acactggagcgaagacgagctcgagagcagcagcagcaggaggagaatgtcagtgtttca
ggaacgtccgagactgtagaaggtcagaacgtgtccggtgtagacctcgagcagaccgag
caagagcagaaggaggaggagaaggaggaggaggaggaggacatccaggtcgcaataaaa
gatctccctgatctggatgatctggatgccgtcaacatggaaacagtgccgaaggaacaa
atcctgattgaggagctgaactga
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