Ictalurus punctatus (channel catfish): 108274629
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Entry
108274629 CDS
T04658
Name
(RefSeq) gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108274629
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108274629
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
108274629
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
108274629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
108274629
NCBI-ProteinID:
XP_017340318
Ensembl:
ENSIPUG00000012929
UniProt:
A0A2D0SC59
LinkDB
All DBs
Position
14:4614025..4644554
Genome browser
AA seq
2216 aa
AA seq
DB search
MYSTRGISEMSSCPMSSSSITGLLSALCDCSLSGVSWKRRSFGGVSRVGLHRALRRRAYA
TLLSKLFQDSSAKPSSAMANALADTPPYNKMLMISFELRVSGRAEDAERLEGLLGQLREA
GRSSGLTELDSVLELLAQLAGSGPPLVSSFSRDCMRRERPVLRRPALQGYLSEELQRLES
RTWALVLEEEWGAFRGVCRTLSVLDAPPGTGLFGLERRLDGEERFERDTRLSLFGALQHS
RTADLDVRLDFPPVPSNADVTGLNIRVPQGLDQSEDEGFQSASNLTPDSQSEQSPSPEPD
MWEALRTFVPARRRCWENVGCPPGQKEPPYLTEAGREAFDRLYRLWEGEMRNMLSSHTPS
PLLPLPLDCQTQLVKDLLNVLIGVASVTFPLNESSVQFDVRADVCVSGTSPESVSRLLEE
LARYGTHYLRLSRFSLGSADKKGLVFQAFTGGLRRYLHYYRACVLSTPASLSLLTIGFHF
RKLGRQLRYLAELCCVDGAAGARQAAFPVGVKLLSYLYNEAQSNCSNENYPVLLSLLKSS
CEPYTRFVSDWMYSGFFRDVYKEFMIQVNEDYLSYRDKHFWVQGYTLISQDAEDCVPVFL
RHIANDVYVCGKTINLLKICCPQHYIWSEVPVPRIAVTFSLREVEEIERDCAVYRGRMET
IAKHSAISREEQALRTELARQELINQVRESAAKTLESIRGHQLSQRLAEEAKKRERFEEL
RHQLELDQEWRNAVKMKQQEDDYSFARELRDREQRLQALEEQLERRARMDLIAQYSRLSE
EAAKKERRALWKVQRLRLHEARVNFLEQDQHTIQVLLVRHALGQECPSQDPDLTKKTPQD
QQESHTPEIQMKNLTMEQKLTALSDSTLPPPCPPAVLPPSTRNFDALISDQNDITDFLMK
RPHPTDSTAVTKALQDIGCDLSEFSKNPNSDYDFSSPYSPLECLRPQSRSAHPSLSHQVP
EPGASQHGHPSQNSCHLEGNAASGHTSHASPSELQPAKETQEQNVATNKCQETNKLPKEK
MLNEEQKEPSACAVDLKPKPPTDSIAEEAKASEQLAQPLRTSAEQIPIDLTLITGSSQDS
DLQSKSKNNVSGVASVSSSNTAQGHSFNADIRTGGLVSDATVVLPSPSIHGHASDAHIKV
GENVSEVTVAVPSRNIHGHASDANIMVGEHVSEVTMAVPSRNIHGHVSDANIQVGELVSD
VIMAVPSRNVHGHASDANIMVGENVSEVTMAVSSRNIHGHASDANIMVGENVSEVTVAVP
SRNIHGHASDANIMVGENVSEVTVAVPSRNIHGHASDANIMVGENVSEVTMAVPSRNIHG
HASDAHIQVGELVSDVTMAVPSRNVLGHASDADIMLGENVSEVTVAVPSRNIHGHASDAH
IQVGEHVSEVTTLTDSRSVHGHVSDAHIKKGELVSEILTPLPSQNIHGHASDAYIKVGDH
VSEDTMAVPSPNIHGHASDNHFQVGVLVSDITVAVPSRNVHGHVSDAHIQVGEFVSEVTS
PTASRSVHGHVSDAHIKIGELVSDVLTPQPSQNIHGHASDAHIKIGEHVSEVPTLTPSPN
IHGHASDAHIKVGEYVSDVALSRPRWSKHGHSSDSTLKVGCLMPEAQPTHSPLPGSAYGH
SSDSTLKVGCVVSGSDPVLSPLPGSAYGHSSDSTLGVGCVVMGPQVPKQPPLPGSAYGHS
SDSTLGLGCVVMGPQVPKLPHLPGSAYGHSSDSTLGVGCVVMGPQVPKQPPLPGSAYGHS
SDSSLGVGCVVQGIRPGSSYSEDPQTGSNLPPDDKNKQDSQEAQAASQTQLLNLGEGLAA
WAQGLGLSPLERPEDDYLLKLASQYHAEQYEDSFRQMMSAPDAQLLQQVTRGPNVLPTDS
SLHCATDSTAVQLSEMMPLPVLMKHSVTTPLITHLSMVNKAVVDYFFVELSVKKHFEALR
HFLLMEDGEFALSLTDRLFEKLGSGQTPGELLTPLVLNSILNKAMQYSVHGDSELATNFT
FALRYLPEVFHPHAPDSLNCLELRYKVDWPLNIIITDSCMNKYNRLFSFLLQLKHMVWSL
SDVWFHLKRTALVKGAGRSVQFRQLQLYRHEMQHFVKVIQGYIANQILQVSWSEFTQKLN
SANDLDAIHHTHAEYLNRAIFRALLTEKAAPVMNIIHSIFSLILKFRGQLIAQAWQSQQG
ETVHPSFVAMQQSYNTFKYYSRFLFKVVSKLVDKGYQPHLEDFLLRLNFNNYYKDS
NT seq
6651 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtacccggggtatatctgagatgtcctcttgtcccatgagcagcagcagcatt
acaggtctcctgtctgcgctctgcgactgcagcctgtccggagtgtcatggaagcggcgc
tcttttggaggcgtctcccgcgtggggctccaccgcgccctccgaagacgtgcgtacgcc
acgctgctttccaaacttttccaggacagctcggccaaaccctcctcggcgatggcaaac
gcgttagccgacacacccccttacaacaaaatgctcatgatctccttcgagctgcgcgtc
tcaggccgtgccgaggacgcggaaaggctggagggcctgctgggacagctgcgtgaagca
ggccgctcctccggtctgactgagcttgactctgtgctggagctcttggcacagctggca
ggttcaggtcctccactcgtgtcctcgttcagcagggactgcatgcggcgtgaacggccc
gtgctgcgcagacccgcgctgcagggttatctcagcgaggagctgcagaggctggagagc
aggacctgggctctggtacttgaggaggaatggggagcgttcaggggtgtttgtaggact
ctcagcgtattggacgctccaccagggactggattgtttggtttggagaggaggctggac
ggagaggagaggtttgagagagacaccagactgtctctgtttggagcgctgcagcactcg
cggacagcagatttggacgtccggctggactttccgccagtccccagtaacgcagacgtc
acgggactcaatatacgggttcctcagggtttggatcagtctgaggatgaaggattccag
tctgcctccaatctgactcccgactcgcagtctgagcagagccccagcccggagcctgac
atgtgggaggccttgcgcacttttgttcctgcgagacgtcgctgctgggaaaacgtgggc
tgtcctccaggtcagaaggagcctccatacctgaccgaagcaggcagagaggcattcgat
cggctgtatcggctctgggaaggcgagatgaggaacatgctctcctctcatactccctct
cctctcctgcccctgcctctggactgccagacgcagctagttaaagacctcctcaacgtg
cttataggcgtggcgtctgttactttccccctcaatgagtcgagcgttcagtttgacgta
cgtgcggacgtgtgcgtgtcgggaacgtccccggagagcgtgtcgcgcctgttagaggag
ctggcgcggtacggcacacattaccttcgcctgagccgcttctctctgggctctgctgat
aagaaaggcctggtgtttcaggcgtttacaggtggcctgcggcgctatctgcactactac
agagcgtgtgtactaagcacacccgcgtctctcagcctcctcaccatcggcttccatttc
cgcaagctgggccggcagcttaggtacctcgcagagctgtgctgcgtggatggtgctgcc
ggtgcgcgccaggctgcgttccctgtgggtgtgaagcttctctcgtacctgtataacgaa
gcacagagcaactgcagtaacgagaactaccctgtgctgctttctctgctcaagagcagc
tgcgagccttacacacggtttgtatcggactggatgtacagcggattcttcagagacgtg
tataaagagttcatgatccaggtgaacgaggactacctcagctacagagataagcatttc
tgggtgcagggctacactctgatctcgcaggacgcggaggactgcgtgcccgtgttcctc
cgtcacatcgccaacgatgtttacgtctgcggaaaaaccatcaacctgctgaaaatctgt
tgcccacagcattatatctggtcggaggtgcctgtgccacgcatcgccgtgacattctct
ctgcgggaggtggaggaaattgagagagattgcgccgtgtaccgcggccgcatggagacc
atcgccaaacacagcgccatcagcagagaggagcaggcgttgcgtaccgagctggcacgc
caagagctcatcaatcaggtcagagagtcagcagccaagacgctggagagcatccgaggc
caccagctgtcacagcgtctggctgaggaggctaagaagagagagcgctttgaagagctg
aggcatcagctagagctcgaccaagagtggcgaaatgctgttaaaatgaagcagcaagag
gatgactacagttttgcccgagagcttagagaccgagaacagaggctgcaggccctcgag
gagcagctggagcgcagggcacgcatggacctgatcgcgcaatacagtcgtctgtctgag
gaggcagctaagaaagagcggagggcactgtggaaagtacagaggttgagactacatgaa
gcccgagtaaacttcctagagcaggaccaacacaccatacaggttctgcttgtgagacat
gctttaggacaggaatgccccagtcaggatccagatcttacaaagaaaacacctcaggat
cagcaggaatcccacactcctgagatacaaatgaaaaatctgaccatggagcaaaagctc
actgctctttctgattcaactctgcctcctccttgccctcctgcagttctccccccatcc
accaggaactttgatgctctgatctctgatcaaaatgacattacagacttcctcatgaaa
cgtccacatcccacggatagtacggcggtaaccaaggctctacaagacatcggctgtgac
ctgtccgaattctctaaaaaccctaattcagactatgacttctcctccccctacagccct
ctggaatgccttaggccccagtcccgctctgctcatccctccctatcccaccaagtccca
gagcctggggcaagtcaacatggccatccttcacagaattcatgtcatctggagggtaat
gctgcctcggggcatacgtcacatgctagtccgagtgaattacagccagcgaaagagaca
caagagcaaaacgtggccacaaataaatgtcaggagacaaataaactgcctaaagagaag
atgttaaatgaagaacagaaggaaccttcagcatgtgctgtggatttgaagccaaaacca
ccaacggatagcatagcagaggaggccaaagctagtgagcagcttgctcagccccttcgg
acatcagctgagcaaattccaatagatctcactctgatcactggcagtagccaagactct
gatctccaaagcaaatctaagaacaatgtctcaggggtagctagtgtttcctcctccaat
actgcccagggtcattcttttaatgctgacataaggactggcgggcttgtttctgatgct
accgtggtccttccctcaccaagtatccatggtcatgcttctgatgctcatattaaggtt
ggagagaatgtttctgaggttaccgtggctgttccctccagaaatatccatggtcatgct
tctgatgctaatattatggttggtgagcatgtttctgaggttaccatggctgttccctcc
agaaatatccatggtcatgtttctgatgctaatattcaagttggagagcttgtttctgat
gttatcatggctgttccctctcgaaatgtccatggtcatgcttctgatgctaatattatg
gttggagagaatgtttctgaggttaccatggctgtttcctccagaaatatccatggtcat
gcttctgatgctaatattatggttggagagaatgtttctgaggttaccgtggctgttccc
tccagaaatatccatggtcatgcttctgatgctaatattatggttggagagaatgtttct
gaggttaccgtggctgttccctccagaaatatccatggtcatgcttctgatgctaatatt
atggttggagagaatgtttctgaggttaccatggctgttccctccagaaatatccatggt
catgcttctgatgctcatattcaagttggagagcttgtgtctgatgttaccatggctgtt
ccctctcgaaatgtccttggtcatgcttctgatgctgatattatgcttggagagaacgtt
tctgaggttaccgtggctgttccttcccgaaatatccatggtcatgcttctgatgctcat
attcaagtgggagagcatgtttctgaggtgaccacactcactgactctcgtagtgtccat
ggtcatgtttctgatgcccatataaaaaaaggagagctggtttctgagattcttactcct
ctaccttcacaaaatatccatggtcatgcctctgatgcttatattaaggttggagaccat
gtttctgaggataccatggctgttccctccccaaatatccatggtcatgcttctgataat
cattttcaagtcggagtgcttgtttctgatattaccgtggctgttccctctcgaaatgtc
catggtcatgtttctgatgctcatattcaagttggagaatttgtttctgaggtgacttca
cccactgcctctcgcagtgtccatggccatgtctctgatgcccatataaaaataggagag
ctggtttctgatgttcttactcctcaaccgtcgcaaaatatccatggtcatgcctctgat
gctcatataaagattggtgagcatgtttctgaggtacccaccttaaccccttcacctaat
atccacggccatgcctctgatgctcacataaaggtgggtgagtatgtctcagacgttgct
ctctctcgccctcgttggagcaaacatggccactcttcagacagcactcttaaggttggc
tgtctgatgccggaagctcaaccaacacattccccattgccaggcagtgcttatggtcac
tcctcagactccacactaaaggtcggctgtgtcgtatctggttcagacccggtgctttcc
ccactccctggtagtgcctatgggcactcgtcagactcgacactgggtgtggggtgtgtg
gtgatggggccacaggtccctaagcagccgcctctcccgggtagtgcctatgggcactcg
tcagactcgacactaggattggggtgtgtggtgatggggccacaggtccctaagctgccc
catctcccgggtagtgcctatgggcactcgtcggactcgacactgggcgtggggtgtgtg
gtgatggggccacaggtccctaagcagccccctctccctggtagtgcctatggacattcc
tctgactctagcctgggtgtaggctgcgtggtgcaggggatcagacctggaagctcttat
agtgaagaccctcagacaggatccaatctgcccccagacgacaagaacaagcaagacagc
caagaggcacaggctgcttcccaaactcagctgctcaatctgggtgagggtctcgctgcc
tgggcccaggggctaggactgtccccgttggagagaccagaagatgactacctcctcaag
ctggcctctcagtaccacgctgaacagtacgaggattccttcaggcaaatgatgtcagcc
cccgacgcacagctcctgcagcaggtgacccgcgggccgaacgttctgccaacggactcg
tctctgcactgtgctacagactctactgctgtgcagctcagcgagatgatgcccctccct
gtactcatgaaacactctgtcaccaccccactcatcacacatttgtcgatggtgaataag
gctgtggtggattatttctttgtggagctgagcgtgaagaagcactttgaagctttgagg
cacttcttactgatggaagacggggaatttgcgctgtcacttactgatcggctgtttgag
aagttgggcagtggacaaacccctggcgagctgctgactcccctggtgctgaactccatc
ctgaacaaggccatgcagtacagcgtgcacggcgacagtgagctggccactaacttcacg
tttgcattacgctaccttcccgaggtgttccatccccacgctcccgactcactcaactgc
ctcgagctgcgctacaaggtggactggcctctgaatatcataataacggacagctgtatg
aataagtacaaccggctcttctccttcctgctgcagctcaaacacatggtgtggtctctc
agtgatgtgtggtttcatctcaaacgcacagctctagtaaagggagcaggacgctcggtg
cagttccgtcagctgcagctatacagacatgagatgcagcactttgtgaaggtgatccag
ggctacatcgcgaatcagatcctgcaggtctcctggagcgagttcacacaaaaactcaac
agcgccaacgacctggacgccatccatcacacacacgcagagtacctcaacagggccatc
ttcagggctctgctgacggagaaagccgctcctgtgatgaacatcatccacagcatcttc
agcctgatcctgaagttccgcggccagctgatcgctcaggcctggcagagtcagcagggt
gagacggtgcacccgagcttcgtcgccatgcagcagtcttacaacacgttcaaatactac
tcacgcttcctgttcaaagtggtttccaaactggtcgataaaggctaccagcctcattta
gaagactttctgctgcgtcttaacttcaacaactactacaaggactcgtga
DBGET
integrated database retrieval system
