Ictalurus punctatus (channel catfish): 108274689
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Entry
108274689 CDS
T04658
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108274689
Enzymes [BR:
ipu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
108274689
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108274689
Prokaryotic type
108274689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
108274689
NCBI-ProteinID:
XP_017340430
Ensembl:
ENSIPUG00000015465
UniProt:
A0A2D0SDW1
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All DBs
Position
14:complement(19028356..19042938)
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AA seq
697 aa
AA seq
DB search
MLVKALRTVRLIWIRTVTLCPHPSRLWFFSNLFRCLQKSHHKQKIFPACRQFSSRRFVPM
EDKEASTALIHPGEKRACPEENSEHTAKKARLQDEANGSHVAKQTEEDKEEMEAEEGGEE
ASLEAEDGEGETFADMMKHGLSEVDVGIYKFVSDHKGFSGILKERYSDFVVHEISKEGKI
MRLDDLSIPVETEEASAEPEPVECQDLTEEQKQQLADLQLFKNKEGNVAIEVEGDSKERR
TLLHKAIKTLYPGLETKTEERESKRFIVAYHAAGKKALAAPRKHSWPKNRGSFCHFVLYK
ENKDTMDAINVLSKFLRVRPNVFSYMGTKDKRAITVQEIAVLKITAERLAHLNKCLMNFK
LGNFSYKKHPLKLGELQGNHFTVVLRNISGSDEQVERAMTSLRDTGFINYYGMQRFGTTA
VPTHQVGRAILQNNWPEVMDLILKPRPGAEKGYLVKCREEWAQTQDPDAALKKLPVKRCV
EGQLLRGLSKYGKKNIITAFGMIPRNNRLMYIHSYQSFVWNTMVSRRVEAYGLKAVEGDL
ILKGGTAHILSAEEAEKHSIHDIVMPLPGFDVIYPTHKVGKGYRDMLEVDNLDIDNMRHK
VRDYSLAGAYRRILIRPNDVSWELIHYDDPKVPLVHTDVEKLENKPGPVFLTEGKYKALK
MEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTVWLN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgctggtaaaggcactgcggacagtaagacttatctggatcagaactgtgactctgtgt
cctcatccttcaagactgtggtttttctctaacttgtttaggtgtcttcaaaaatcccat
cataagcaaaagatctttcctgcttgtagacagttttcctctcggagatttgtaccaatg
gaggacaaggaggcttcaacggcgctgattcatcctggggagaagcgagcgtgccctgaa
gagaattcagaacacactgcgaagaaagcccgacttcaggatgaagctaatggcagccat
gtcgccaaacaaacagaggaagacaaagaagagatggaggcagaggagggtggagaagag
gcatctttggaggctgaagatggagaaggagagacctttgctgatatgatgaagcatgga
cttagtgaagtagatgtaggaatctataagtttgtcagcgatcataaaggattctctgga
atcttgaaagagaggtactctgattttgtggtgcatgagattagcaaggaggggaagatc
atgcggctagatgacctctccatacctgtcgaaacagaggaagcatctgcagagcctgag
ccagtagagtgtcaggacctgacagaagagcaaaaacagcagcttgctgatctgcaacta
ttcaaaaacaaagagggaaatgtggctattgaggtggaaggagattccaaggagaggcgt
actttgcttcataaagcaatcaaaaccctatacccaggactggagaccaaaactgaggaa
agagagagcaagaggttcatagtggcatatcatgcagctgggaaaaaagcactggcagca
ccaagaaaacactcatggcctaagaaccgtggcagcttctgccattttgtgctttacaag
gagaataaagacaccatggatgccatcaacgttctctccaaatttctcagggttcgaccc
aatgtcttctcctacatgggcacaaaagacaagcgagccataacagtgcaagagattgct
gtgttaaaaatcaccgcagaacgattggctcacctcaataagtgcctgatgaacttcaaa
ctgggaaacttcagctataaaaagcaccctctgaaactgggggagctgcaggggaaccat
ttcacagtggtactcaggaacatctcaggctctgatgaacaggtggaacgggccatgaca
tcactcagggacacaggctttatcaactactatggcatgcagcgctttggcaccacagct
gttcccacacatcaagttggcagagccatcctgcagaacaactggcctgaagtgatggac
ctgatcctaaagccacggcctggggcggagaagggctatctggtgaaatgtagagaggaa
tgggcccagacacaggatcctgacgcagctctgaagaagctgccagtgaaacgctgtgta
gagggacagctcctgagaggactgtcaaagtatggcaaaaaaaacatcattacagctttc
ggaatgatccctcgcaacaacaggctcatgtacatccacagctaccagagcttcgtgtgg
aacaccatggtcagcaggagagtggaggcctatggcctcaaagctgtggaaggagaccta
atactcaaaggaggcactgctcacatcctgtctgcagaggaagctgagaagcactccatt
catgatattgtgatgccactgcctggatttgatgtcatctatcccacacacaaggtgggg
aaaggctacagagacatgctggaagtcgataatctggatatagataacatgaggcataaa
gtacgagattattcactggctggagcttaccgtcgcatcctcatacgccctaatgatgtc
agctgggagctgattcattatgatgaccccaaagtgcctctggtccacacggatgtagag
aaattggaaaacaaaccaggaccagtttttctgacagagggtaaatacaaggctctgaag
atggagttctccctccctccatctacctacgccaccatggccatcagagaagtgcttaaa
atggacaccagcatcaagaaccagacccagcttaacaccgtgtggctgaactga
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