Ictalurus punctatus (channel catfish): 108274743
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Entry
108274743 CDS
T04658
Name
(RefSeq) LOW QUALITY PROTEIN: kelch-like protein 42
KO
K27973
kelch-like protein 42
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108274743
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108274743
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_1
Kelch_6
Kelch_KLHDC2_KLHL20_DRC7
Kelch_3
BTB
Beta-prop_ATRN-LZTR1
Kelch_5
NANM
BTB_KLHL33
Kelch_4
BACK
BACK_BPM_SPOP
Motif
Other DBs
NCBI-GeneID:
108274743
NCBI-ProteinID:
XP_017340534
UniProt:
A0A2D0SCT4
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All DBs
Position
14:1656830..1659536
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AA seq
470 aa
AA seq
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MSSPEQLIEIVMDNRSYNVSKSKLIEKSDYFRALYSSGMREAGEDSVQLQGLSVPGLELV
LEFINTSKVQVVNETLEDLIETASFLQVTPILKLLLSEIRPDNCVEVFNLSEVYGAHELR
TACLKFMSCHYHPMLRRPEFHALPAELREQVREMRMRGTATLVVVGDFVGTCLDLADQDE
PWSMLRYVERXQRWKPLANNLPPDMVNVRGYGSAVLDNYLFIVGGYRMASQEIAAARCYN
PCRNEWTHIAHLNQKRANFKLVAVSGRLYAVGGHGLSAVECYGPEQDWWTCVSSMPDPLT
EFSACECQGMIYVMGGYTARERNTNVLRYCPASDTWSALRTCSAHVRKQQMLSVEDVIYL
VGGYTRELEKAEAARANPAEDALTVQSYNVRTGEWLQLRASASKSGLNLTCALHNDGIYI
MSRDVGPRTSLEHRVFLKYNVFSDAWEAFRRFPALGHNVLLCSLYLPNIL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcctgagcagcttatcgagatcgttatggacaacagatcgtataacgtgagc
aagagcaagctgatcgagaagagcgactacttccgggcgctgtacagctctggcatgcgg
gaggctggagaagattcagtgcaactgcaaggactgagtgtaccagggctcgagctcgtc
ctggagttcattaacacctcgaaagttcaggtggtcaacgaaaccctggaggatctcatc
gagacggcgtctttcctgcaagtgacacccatcctcaagctgcttctgtctgaaatccgc
ccagacaactgtgtcgaggtcttcaacctgtccgaggtctacggcgcccacgagctgcgc
acggcatgcctgaagttcatgagctgccactaccaccccatgctgcgcagacccgagttc
cacgcgctgccagctgaactgcgtgagcaggtcagggagatgcggatgaggggcacggcc
acgctggtggtagtcggagacttcgtgggcacctgcctggacctcgctgatcaggacgag
ccgtggtccatgctgcgttacgtggagcgatagcagcgctggaagccgctcgccaacaac
ctccctccggacatggttaacgtcagagggtacgggtcagctgttcttgacaactacctt
ttcatcgtgggtggctacaggatggcaagccaagagattgctgcagcacgttgttacaat
ccatgcagaaacgaatggactcacatagctcatctgaaccagaaaagggcgaactttaag
ctggtggcagtgagtgggaggctgtatgcggttggaggacatggtctgagtgcggtggag
tgctatggtcctgagcaggattggtggacctgcgtttcctccatgcctgatcctctgact
gagttctctgcatgcgaatgccagggcatgatctacgtcatgggtggctacacagccaga
gaaaggaacacgaacgtgttgcgctactgccccgcgtcggacacgtggtccgcgttgcgt
acgtgctcggcccacgtgcggaagcagcagatgctgtccgtggaggacgtcatctacctg
gtgggcggctacacgcgtgagctggagaaagccgaggccgcgagggccaaccctgccgag
gacgcgctgacggtgcagtcttacaacgtgcgcacaggtgagtggctgcagctgcgtgcg
agcgcctccaagtccggcctgaacctgacgtgcgctctgcacaacgacggcatctacatc
atgagccgcgacgtcggcccacgcaccagcctcgagcaccgcgtcttcctcaagtacaac
gtgttcagtgatgcctgggaggccttccgacgcttcccggcacttggccataacgtgctg
ctctgttccctgtacctgcccaacatcctctaa
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