KEGG   Ictalurus punctatus (channel catfish): 108274798
Entry
108274798         CDS       T04658                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ipu03016]
    108274798
Enzymes [BR:ipu01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     108274798
Transfer RNA biogenesis [BR:ipu03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    108274798
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf_CCCH_4 Drf_FH3 FMN_dh
Other DBs
NCBI-GeneID: 108274798
NCBI-ProteinID: XP_017340664
Ensembl: ENSIPUG00000004025
UniProt: A0A2D0SD64
LinkDB
Position
14:complement(28220213..28228665)
AA seq 696 aa
MSSGQDSYQICGLELVGHSLRYGSELKCGRLVLRPDTFQCNTATLSRLCGCSYRMEGGDV
NSAEGSTIQTTDRGEAALKTQYITNKENFYEFLATGFKSEKAEDEKASAEVPIDGAEEQS
REPETKKRKVDGDEQTKDKKKRRGQNKSRPHLKPHSYEAQRLCPSLIQESERKCFYGEKC
KFIHDVADYMSTKPEDLGDTCYLYDTFGRCPYGVTCRFAKAHTGPDYKNLVNEELRKSLD
RTETVRNSLDKELQRRLRKKQVSFKSSENFLKSISAGKKQHGKSSMSENTPNELRQEEEV
SQSETRQEGPAAELKTEESQTKPPPVKTIGPLTDDDIIKLRPCEKKQVDFRDKLYLAPLT
TCGNLPFRRVCKRFGADITCGEMAMCTNLLQGQTSEWALLKRHHTEDVFGVQLEGCFPDS
MTRCAELLNHNIDVDFVDINSGCPIDLVYKKGGGCGLMTRANKFEQIVRGMNSVLDVPLT
VKIRTGVQQNCNIAHKLIPELKKWGVSMITLHGRSREQRYTKLADWSYIDTCSKLAAPVP
LFGNGDVLSYEDAMRARETGVSGIMVARGALIKPWLFTEIKEQRQWDISSSERLQILRDF
THFGLEHWGSDTQGVEKTRNFLLEWLSFTCRYIPVGLLERVQKINERPPYYLGRDYLETL
MASQHVDDWIRISEMLLGPVPKNFSFLPKHKANAYK
NT seq 2091 nt   +upstreamnt  +downstreamnt
atgtcttcagggcaggattcgtatcaaatatgtggtttggagctggttggacattcgttg
agatacgggtcggaattaaaatgcgggcgcttggtgctgcgcccggacacatttcagtgt
aacaccgctaccctgtcacgtttatgtggttgtagttataggatggagggtggtgatgtg
aacagtgcagagggcagcacaattcagaccacagacagaggagaagcggctctgaagaca
cagtacatcacaaacaaagagaatttttatgagttcctggccactggattcaagagcgag
aaagctgaagatgagaaagcatcagctgaagttcccatagatggagcggaggaacagagc
agagaaccggagacgaagaagcggaaagtggacggtgatgaacagacaaaggacaagaag
aaacggagaggccagaacaagtcgagacctcacctgaaacctcacagctatgaggctcaa
agactctgcccctcactcattcaggagtctgagaggaagtgtttctatggtgagaagtgt
aagttcatccatgacgtggctgattacatgtccaccaagccggaagatctgggagacacc
tgttacctttacgacaccttcggcagatgtccatatggagtcacctgcaggtttgctaaa
gctcacacaggcccagattacaaaaacctggtgaacgaggagctccgtaaaagcctcgat
agaacagaaactgtgcggaacagtctggataaagagctccagagacgtctcagaaagaaa
caagtgtccttcaaaagctcggagaacttcctcaagagcatcagcgcggggaaaaaacaa
cacgggaagtcgtccatgtctgaaaacacaccaaatgagttgagacaggaagaggaagtg
agccagagtgagaccagacaggaaggtcctgctgctgagctcaaaactgaggagagtcag
acgaagccacctcctgtgaagaccattgggccattaacggatgatgacatcatcaaactg
cgcccatgtgagaagaagcaggtagatttcagagacaagctctacctggctccattaaca
acgtgtgggaacctgccattccggcgtgtgtgtaagcgttttggagctgatataacgtgt
ggagagatggccatgtgcaccaacctgctgcagggtcagacgtctgagtgggctctgctc
aagagacaccacactgaggatgtgtttggagtgcagctggaaggatgtttccctgactcc
atgacccgctgtgctgaactcctcaaccacaacatcgacgttgactttgtggacatcaac
tctggctgtcctatagacctagtgtacaagaagggtggtggatgtggcctgatgaccaga
gccaacaaatttgagcagatagtgagaggaatgaactctgttctggacgtgcctttaacg
gtgaagatccgtacaggagtgcagcagaactgcaacatcgcacacaaactcatccctgag
ctgaagaagtggggtgtgtctatgatcacgttacatggtcgatcccgagaacagcgttac
accaaattggccgactggagttacatcgatacctgctcaaaactcgccgctcctgtcccc
ttgttcggtaatggtgatgttttgtcgtatgaagatgctatgagggccagagagacagga
gtgtctggaatcatggtagcaagaggtgccctcataaagccgtggctcttcacggagatt
aaggagcagagacagtgggacatctcgtcctcagagcgtctccagatccttcgagatttc
acccactttggattggagcactggggctcggacacacagggagtggagaagacacgcaac
ttcctgctcgagtggctctccttcacctgcaggtacatcccagtgggactgctggagcgt
gtacagaagattaatgaacgtcctccatattatttgggtcgtgattatctggagactctg
atggcgagtcagcatgtggatgactggatcaggatcagtgagatgttgctgggtccggtg
ccgaagaactttagcttcctgcccaaacacaaagctaacgcctataaataa

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