Ictalurus punctatus (channel catfish): 108274822
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Entry
108274822 CDS
T04658
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108274822 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108274822 (grin2ca)
04082 Neuroactive ligand signaling
108274822 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108274822 (grin2ca)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glutamate (ionotropic)
108274822 (grin2ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
108274822
NCBI-ProteinID:
XP_017340729
Ensembl:
ENSIPUG00000005977
UniProt:
A0A2D0SDD6
LinkDB
All DBs
Position
2:26596439..26664986
Genome browser
AA seq
1418 aa
AA seq
DB search
MGVRLGHLSDALWPPLLLLLFLCAWHCCWGRPFTMPDPTVNVAVVFSGSAYQVEIKGRLS
RENFLDLPLEVNPITVLVNDSNPRALLTRICDTLAANRVHGVVFEDNIGSEAVTQILDFI
STQTSVPIVGISGGSAVVLPYKDDGSNFLQLGASIEQQINGMFKVMEEYNWYSFAVVTSQ
YPGYEAFVDYIRSFTDTSYFLWELQNVLTFDMSADGTNDLRARRLLQQIDAQVLLVYCSF
EEAQYLFSMAREVGLVGPGYIWIIPSLAVGNPNLPPPESFPVGLISIITDRWKMSLRNRV
RDGVAIIVKAVESFRKHRGFVPDGHADCQSSPGQPVKNDTLFRHMLNVSWDNTDFSFNSD
GYLINPSMIIITLDRDRQWDKVGNYEYGILQMRYPVWPRYGTYLEPVSDNRHLTVATLEE
RPFVIVEAVDPNTGTCLSNTVPCRRQSNKTEVIIGDTEPYTKLCCKGFCIDILKKLSRNI
KFSYDLYLVTNGKHGKLVRGVWNGMIGEVVYKKADMAIGSLTINEERSEIIDFSVPFVET
GISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSA
KDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAA
FMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQK
GVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRW
KRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLS
LLVFAWEHLLYWKLRHSVHKSERLDFLLAISRGIYSCFNGVEDTDHNGSIQSPDVTSSYT
QANMLKMLKTAKDIVSSARVENSLDNATKTIENWSRRAPEASKPSLPTRLISTDASHGRL
PYISSVTSNHTPYTQRALTPTFPLHYGDSATLLEKPRVVSRPTPLRYTLPARTSHHHIYE
RTLPISSLSSPHIAMRDPPPPTAPKPHHSARLFMDSQGCHQMASSFLPYREFHAPDIYVE
HQKPPESRKLYTEGLGHKKRSHSYVAPSPEPRRRNDYNEPTSCLAELRANQLLENHAHTS
PCMGSHYQRPSGSCNSCMKPYLEPDMDDVPLLGKEKLNRRASFLRATWGGDRLRHLDEKP
STSASSSSRINMPDLFPRVVVANPKPSKMYASASNNFCYNMPAEPAYLDPAHMGSYPYKP
QKLKYSHSTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYMGPLPQGPTH
FYDHSKDMCHLFPCINHCTNDAALVTRIGGRPVMYENTAFGGYGGVGCSREQPPLQPLHS
LRASSKNRDRRQVLVARRLNSPYVPKPWGRVSSLESEV
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctaggccacctgagcgatgctctctggccgccactgctgttgttgctg
tttctctgtgcctggcactgctgctggggccggccatttacgatgcctgatccgactgtg
aatgtagcggtggtgttcagtggctctgcctaccaggtggagattaaaggacgcctgagc
cgggagaacttcctggacctgcctctggaagtgaaccccatcacagtgctggtgaatgac
agcaatcctcgggcactgttgacacgcatctgtgacacactggctgctaatcgcgtgcat
ggcgtggtcttcgaggacaacatcggctctgaggctgtgacacagatcctggacttcatc
tcgacgcagacttccgtgccaattgtaggcatcagtggaggctctgctgtcgtcttgcca
tacaaggatgacggctccaacttcctgcagctgggcgcttccattgaacagcagatcaat
ggcatgttcaaagtgatggaggagtacaactggtacagttttgcagtggtgactagccag
taccctggttatgaggcctttgtggactatattcgctccttcacagacacctcctacttt
ctgtgggagctacagaacgtactgacttttgacatgtcagctgatggcacgaatgacctg
cgtgcacggcgtctgctacagcagatcgatgctcaggtattgctggtctactgttcattt
gaagaggctcagtatctcttcagcatggccagagaggtgggcctggttggacctggttat
atttggatcatccccagcctggcagtgggcaaccccaacctgccaccacctgaaagcttc
cctgttggcctaatcagcatcatcacagaccggtggaagatgagtctaagaaacagagtg
agggacggcgttgccatcatagtgaaagcggtggagagcttccgcaaacacagaggattt
gttcctgatggacatgctgactgccagtccagtccagggcaaccagtaaaaaatgacaca
cttttcaggcacatgttgaatgtgtcgtgggataacacagacttctcattcaacagtgat
ggatacctcatcaacccttccatgattatcattacactagatcgggacaggcaatgggac
aaggtgggaaattacgagtatggtatactgcagatgcgctatcctgtctggcctcggtat
ggaacgtacttggagccggtgtctgataaccgccacctaacggtagccacccttgaagag
aggccatttgtgatagtggaggctgtagacccaaacactggcacctgcctcagcaacact
gtgccctgcagacgccaatcaaacaagacagaggtgatcattggagatactgagccctac
accaaactgtgctgtaaaggcttttgcattgacatcctaaagaaactttcccgtaacatc
aagttctcatatgacctctatttggtcaccaatggcaagcatggcaagctggtccgaggc
gtttggaatggcatgattggagaggtggtctataagaaggcagacatggccattgggtct
ctcactataaacgaggagcgctctgagatcattgacttctccgtgccgtttgtggagaca
gggatcagtgtgatggtggccaggagcaatggaactgtgtctccatcagcctttttggag
ccctacagccctgctgtgtgggtgatgatgtttgtgatgtgcctgacagtggtggctgtg
actgtgtttgtgtttgagtacttcagccctgtagggtacaatcgtagcctggtcagtgcg
aaagatccaggtgggccaacctttaccattgggaagtcagtgtggctgctttgggggatt
gtcttcaacaattctgtgccgattgagaacccaaagggcaccacgagtaagatcatggtg
ctggtatgggccttcttcgctgtcatcttcctggccagttacacagccaacctggcagca
ttcatgatccaggagcagtacattgacactgtttctggactgagcgacaaaaagttccag
aagccacaggagcagtatccaccatttcgcttcggtacagtgcctaacggcagcacagag
cggaatataaggagcaactatcctgagatgcactcccacatggtcaagtacaaccagaag
ggtgtggaagatgcactaaatagcctcaaaacaggaaaactcgatgcctttatttatgat
gccgccgtactgaactacatggctggtaaagatgagggctgtaaactggtgaccattggc
agtgggaaggttttcgcaactacaggttacggcattgccttacagaaggagtcccgctgg
aaacggcccattgaccttgccctcctccagtttcttgctgatggtgatactcagaagctg
cagacagtgtggctgactggaatctgccgtaatgaaaagaaagaagtgatgagctccaag
ctggatattgacaacatggctggagtgttctacatgttgctggtggccatgggtctcagt
ctgctggtgtttgcttgggagcacctgctctactggaaattacgccactctgtgcacaag
tctgaacgcctcgacttcttactggcaatcagtaggggtatctacagctgcttcaatggc
gtggaggatacagaccacaatggaagtatacagagcccagatgtcactagcagttacacc
caggccaacatgctgaagatgcttaagacagccaaggatattgtatcctcagccagagtg
gagaactccttggacaatgccactaagacgattgagaattggagccgccgagctccagaa
gcttcaaaacctagtcttccgacccgtctgattagcactgatgccagtcatggccgtttg
ccctatatctccagtgttaccagtaaccatacaccttacacccagagggcactgactccc
acattccctctgcattatggagacagtgctaccttgctagagaagcctcgggtagtgtca
aggcctaccccattacgctacactcttcccgcacggacgagtcaccatcatatatatgaa
cggacactaccaatttctagtctaagcagtccccatattgctatgagggaccccccacct
cccacagccccaaagccacaccacagcgccaggctattcatggacagccagggctgccat
caaatggcctcttcctttctcccttaccgtgagttccatgctccggacatctatgtggaa
caccaaaaacctcccgagagccggaaactgtacactgaagggctggggcacaagaagagg
tcccacagctatgtggcaccatcaccagaacctcggcgtagaaatgattataatgaacca
acctcttgcctggctgagcttagagctaatcagctcctggaaaaccatgcccatacttca
ccctgcatgggaagccactaccaaaggcccagtggcagctgcaactcctgcatgaaacca
tatttggagccagatatggatgatgtcccactgctgggaaaagagaaactgaaccgtcgc
gcctctttcctcagggccacatggggtggtgacaggttgcggcatctagatgagaagcct
tcaacctctgcatcttcttccagtcgcatcaacatgcctgacctctttcctcgtgtagtg
gtagctaatccaaagccttcaaagatgtatgccagtgctagtaacaacttttgctacaat
atgccagctgagccagcctatcttgacccagctcatatgggatcctacccctacaagcca
cagaaactcaaatactctcattctacccgccttccctcgtaccgtgaggcaattctgcag
aatgcagcagctctgcggcggtcgtcttccacagttgtgcacagacattactccacctac
ctgaactcatacactgacttgccagtatacatgggcccactgccacaggggcctacacat
ttctatgatcactccaaagacatgtgtcacctgttcccctgcatcaaccactgcacaaat
gatgctgccctggtaacccggataggtggaaggcctgtaatgtatgaaaatactgctttt
ggaggctatgggggtgttggatgctcacgtgaacaaccacctctacagccactgcacagt
ttacgagcctcatctaagaacagggaccgcaggcaagttttggtggcgcggaggcttaac
agtccctatgtgccaaagccctggggcagagtatctagtctggagtctgaagtctaa
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