Ictalurus punctatus (channel catfish): 108274960
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Entry
108274960 CDS
T04658
Name
(RefSeq) iron-responsive element-binding protein 2 isoform X1
KO
K22416
iron-responsive element-binding protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108274960
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108274960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Tubulin_C
Motif
Other DBs
NCBI-GeneID:
108274960
NCBI-ProteinID:
XP_017340912
Ensembl:
ENSIPUG00000014808
UniProt:
W6A3A8
LinkDB
All DBs
Position
14:complement(2913130..2948987)
Genome browser
AA seq
975 aa
AA seq
DB search
MALTSSHQDHPFGHLIDTLPSKKNDIRKYFNPQKLGDPKYERLPFCVRVLLEAAIRKCDG
FYVKQEDVYSILNWEERQNEAEIPFSPARVLLQDFTGIPAMVDLAAMRDAVAKNGLDPNL
INPKCPTDLIVDHSLQIDFSKCAIQNAPNPGGGDGHGPGPRSVPGRPAPRSHHASSSGAQ
CGGQRGGCTKGSCTDLPTRATAVQIENTPLLCPFHLKPVSEPETALKNQEMELIRNKERL
QFFKWCSKAFKNVNVVPPEIGSVHQVNLEYLSRVVQESEGFIYPDSVVGTDSHTTMINGL
GILGWGVGGIETEAVMLGQPISFTLPQVVGCKLVGSVNILTTSIDIVLGITKHLRQAGIS
GKFVEFFGPGVCQLSAADRTTIANMCPEYSATVSFFPVDDITLKHFKQTNFTEEKLEVLE
TYLKSVKLFRSAADQSEDPHYTEVIEINLSYIVPNVSGPKRPQDRVPVSCVKEDFLNCLN
EKVGFKGFHIPREKQSAVVPFLHDGTEYTLVHGSVVIAAVISCTNNCNPSVMLTAGLLAK
KAVAAGLSVKPYIRTSLAPGSGMVTHYLNASGVLPYLNQLGFEVIGYGCATCVGNTAPLP
ESVVDAIKQGDLIACGVLSGNRHFEGRLCDCVRANYLASPPLVLAYAIAGTIGIDFENQP
LGVNGDGKEVFLKDVWPSKEEVQDVEEHMVIASIFTELRSRMQKGSTFWNNLDAPDAVFF
PWDAKSTYIRCPPFFNKLSKEVCPPGSIDNAHVLLFLGDKVTTDHISPAGSIARVSAAAK
YLQSKRLTPREFNSYGARRGNDAVMTRGTFASIKLLNRLVGKPGPKTVHVPSGQTLDVFE
AAERYQRDSIPLIILAGKDYGSGSSRDWAAKGPYLLGVRAVIAESFEKIHKNHLVGMGIA
PLRFLPGQSAETLGLCGKERFSISIPEQITPQQELTVLTSTGKSFSVVALFENEMDVALY
RHGGILKYVARSMLK
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcacttcctcacatcaagatcacccgtttggccatttgattgacaccttacca
agcaagaaaaatgacattagaaaatatttcaatcctcagaagcttggagatcccaagtat
gagcgtctgccgttctgcgtccgtgtgctgctcgaggctgccatccggaagtgtgatggc
ttctatgtgaaacaggaggacgtgtacagtattttgaactgggaagagcgtcagaatgag
gccgagatccccttctctccagcgcgagtgctgttacaagacttcacgggtattccagcc
atggtggacctggcagccatgagagatgctgtagccaagaatggcctcgaccccaacctc
atcaaccccaaatgtcccactgaccttatagtagatcactcactacagattgacttcagc
aagtgtgccatccagaacgcccctaaccctggcgggggcgatgggcacgggccaggacct
cgctctgttcctggccgtccggctccacgtagccatcacgccagcagcagcggcgctcag
tgtggaggtcagagaggaggctgcaccaagggctcctgcaccgacttgcccactagagcc
accgcagtacagattgagaacacgccacttctgtgcccttttcacctaaagcctgtttcc
gagcctgagacggctctcaaaaaccaggagatggagctcataagaaataaagaacgactt
cagttcttcaagtggtgttcgaaagcattcaagaacgtgaatgtggttcctccagagatc
ggctcagttcatcaagttaatctggagtacctgtctcgcgtggtacaggaaagtgagggt
ttcatttacccggacagtgtagtgggcacagactctcacactaccatgatcaatggcctt
ggtatacttggctggggagtaggaggtatagagacggaggccgtcatgctgggtcagccg
atctctttcacgctgccgcaggttgttggatgtaagctagtggggtccgtcaacattctg
actacatctatagacatcgtccttggcatcactaagcacttacgccaggctggtatcagt
gggaagtttgtggagttctttggtccaggtgtgtgtcagctctctgctgcagacagaacc
accattgcgaacatgtgtcctgaatacagcgccaccgtcagctttttccctgtagacgat
atcacactcaagcactttaaacagaccaacttcacagaagaaaaacttgaagttttggag
acttaccttaaatctgtgaaactgttccggagtgccgctgaccagtcagaggatccacat
tatactgaggtaatagaaataaacctgagttacatcgtccccaatgtgagcggacccaaa
cggccacaagaccgagtgcccgtcagctgcgtgaaagaggatttccttaactgcctcaat
gaaaaggttggttttaaagggttccacattccgagggaaaagcaaagcgctgtggtgccg
tttctacatgacggcactgaatacacactcgttcacggatcagtcgtcatcgctgccgtc
atcagctgcaccaacaactgcaacccttctgtcatgctcactgcaggcctcttagcaaag
aaagcggtggcggctggtctttctgtgaaaccttacatcaggaccagcctcgctccgggg
agtggcatggttacacactacctcaatgccagtggagtgctgccttacctcaaccagctt
gggtttgaggtgattggttatggatgtgccacctgcgtaggaaacacagcacctttacct
gaatctgtagtagatgccatcaaacagggggatttgattgcttgtggagtgttgtcaggg
aacaggcatttcgaggggcgtctctgcgattgtgttcgtgccaactacctagcctcaccc
cctttggtgttggcgtacgccatcgcaggcacaatcggaatcgattttgagaaccagccg
ctcggtgtgaacggtgacggtaaggaggtgttcctgaaggatgtgtggccgtctaaagaa
gaggtccaggatgtagaggagcacatggtcatcgcctcaatattcaccgagctgaggagc
aggatgcagaaagggagcactttttggaacaacctagacgctccagatgctgtgttcttc
ccgtgggatgccaagtccacgtatatccgctgccctccattcttcaacaaactttctaaa
gaagtgtgtcctcctgggtcgattgataacgcacacgttctgctgtttctgggggacaaa
gtcaccactgaccacatctctcctgccggcagcatcgcacgggtcagcgcggccgccaag
tacctacagagcaaacgcctgacacctcgcgaattcaactcttacggcgcacgcagaggg
aacgatgctgtgatgactagaggaacttttgccagcatcaaactcctaaaccgtctcgtc
ggcaaacccggccccaaaaccgtgcacgtcccgtcaggacagacgctggacgtgttcgag
gcggcggagcggtaccagagagacagcattcctctcatcatcctggcagggaaagattac
ggctcaggcagctcacgagactgggcagccaaaggaccttacttactgggagtgcgagcg
gtgatcgctgagagttttgaaaagatccataagaaccacctggtgggaatgggcatcgct
cctctgcggttccttcctggccagagcgctgaaaccctggggctctgtgggaaagagagg
ttctccatctccatcccagagcagatcactcctcagcaagagctaactgtgctgaccagc
actggaaagagcttcagtgtggtggctttgttcgagaacgagatggacgtggccctttac
agacacggaggcattctgaaatacgtggcccgcagtatgctgaagtaa
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