KEGG   Ictalurus punctatus (channel catfish): 108274970
Entry
108274970         CDS       T04658                                 
Symbol
lsm14aa
Name
(RefSeq) LSM14A mRNA processing body assembly factor a isoform X1
  KO
K18749  protein LSM14
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    108274970 (lsm14aa)
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108274970 (lsm14aa)
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 108274970
NCBI-ProteinID: XP_017340929
Ensembl: ENSIPUG00000022820
UniProt: A0A2D0SDY7
LinkDB
Position
14:complement(14836159..14848029)
AA seq 454 aa
MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPILPRDE
TYEYIIFRGSDIKDLTVCEPPKPSLPQDPAIVQSSMGSAAAPSAFQSGNSYGLFKQAPVS
PYSQFAASPLVSPPFGTVGGRSSPALDPLQKSPPVEPSAPVTSSVRSTAPVSRRSPVTAR
LGTSAQKPLDTPEQRRGEGRSRLRSGLGHAAADTNVVHSGFQSAGIDAPKGAARPESDQS
RGESKEAPKRQAAAGPPGPRRGRGGGHRGRGRFPVRRDGPMKFEKDFDFESANAQFNKEE
IDKEFQSKLKLKDEKPEKALNGEDKGDSGVDTQNSEGNADEEDPLGPNCYYDKSKSFFDN
ISCDDMRERRQTWAEERRMNAETFGVPFRHNRNRGGFRGRGGMGFRGGRGRGSSRGAFGA
QHPGGSGFRGGYRGGQGGRQFSSFEYRKDNKVTA
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgagcggagggacgccgtatatcgggagtaaaattagcctgatttccaaggccgagatt
cgctatgagggaatcctctacactatcgacaccgagaactccacagtcgcactcgccaaa
gtgcgctcgtttggaactgaggatcgccccactgacagacccatcctgcctcgggatgag
acctatgagtacatcatcttcagagggagtgacattaaagacctgactgtttgtgaacct
cccaagccatctttgcctcaggaccctgcaattgttcagtcttctatgggatctgctgcg
gcaccttcagctttccagagtggaaactcttatggattgtttaaacaggctccagtgtct
ccgtacagccagttcgcagccagtccgttggtctcacccccatttgggactgtcggaggt
cgcagcagtcctgcactcgacccgttgcagaagagtccgcctgtggagccatcagcacca
gtgacctcgtcagtcagaagtaccgcgcctgtgagccgcaggagccccgtcacggcacga
ctcggcacgagtgctcagaagcccctggacaccccggaacagaggaggggcgagggccgg
tctagactacgctccggactcgggcatgcagcagcagatactaacgtagttcactcgggt
tttcaatcagcaggcatcgatgcaccaaaaggggctgcccgaccagagtctgatcaatcc
agaggtgaaagtaaggaagcccctaagcggcaagcagctgctgggcctcccggtccgcgt
cgtggacgtggtggagggcatcgggggagaggccgtttccctgtgagaagagatggaccc
atgaaatttgagaaagattttgattttgagagcgccaatgcccaatttaacaaggaggag
attgacaaggagttccagagcaaactcaagcttaaagatgagaagccagagaaggctttg
aatggggaggataaaggtgattcgggggtggatactcaaaacagtgagggtaatgctgat
gaggaagatccattgggacccaactgctactatgacaagtccaagtctttctttgacaac
atctcgtgcgatgacatgcgggaaaggagacagacgtgggcagaggagaggcgaatgaat
gctgagacctttggggtcccattccgccacaacagaaaccgaggtggatttcggggccgt
gggggcatgggcttccgtggtggacgtggtcggggaagcagccggggggcatttggagcc
caacatccaggtggcagtggattcagagggggttacagaggaggccagggaggaagacag
ttctccagttttgaatacaggaaggacaacaaagtaactgcgtag

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