Ictalurus punctatus (channel catfish): 108274972
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Entry
108274972 CDS
T04658
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108274972
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108274972
Transporters [BR:
ipu02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
108274972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
nSTAND1
TMD0_ABC
AAA_23
Lipin_mid
E7
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
108274972
NCBI-ProteinID:
XP_017340933
Ensembl:
ENSIPUG00000004801
UniProt:
A0A2D0SFB6
LinkDB
All DBs
Position
14:complement(12024118..12081030)
Genome browser
AA seq
1614 aa
AA seq
DB search
MISRYRPSPDCTMSLSFCGSENNSIAYNVDRGVLNNGCFLDALTVVPHVFLLFITFPILF
IGWGSQSSKVHIHHSTWLHFPGHNLRWILTFILLFVLVCEIAEGIVSDGFTQSLHLHLYM
PASLAFMAAITSIIYYHNIETSNFPKLLLALLIYWTLAFITKTIKFAKYTEHGIGMRQLR
YCLTGLLVLLYGLLLAVEFNVILGRRYMCFAHPTEVKPPEDLQDLGVRFLQPFVNLLSKG
TYWWMNTFITSAHRRPIDLKVIGKLPIAMRALTNYLKLRKAFEAQKRPDGLQRQGPQWIW
RALREAFGKPLILSITFRFLADLLGFAGPLCISGIVHHISKKNHTIQAPAQLLGVYFISS
QEFLANAYVLAVLLFFALLLQRTFLQASYYAAIQTGINLRGAMQTKIYNKIMRLCTSNMS
MGEMTVGQICNLVAIDTNQLMWFFFLCPNLWAMPVQIVVGVILLYYLLGISALIGATIIA
LLAPVQYFVATKLSQTQKTTLEYSSERLKKTNELLRGIKLLKLYSWEHIFCSSVEETRGK
ELTSLQAFAVYTSISIFMNAAIPIAAVLTTFVVHVHLSDDADLSPAVAFASLSLFHILVT
PLFLLSSVVRSTVKALVSVQKLSEFFSSDEIGEEQEPKATIPAVSTNHSNYQALPLKVVN
RKHPVRDEWNSFGLKSEQYIEAAAVEDEDICIKINNGYFSWTDGAPTLSSVNIKIPFGQL
TMIVGQVGCGKSSLLLAALGEMQRISGTVTWNRKWSSDGCRGQSVNLGCSRKPSIIPKLD
SEGDESPDVPGDEEFRKRCAVAYASQKPWLLNASVVENITFEMPLIKQRYKTVIEACSLQ
PDIDILPQGDQTEIGERGIILSGGQRQRISVARALYQTTNVVFLDDPFSALDIHLSDHLM
QEGILKLLREEKRTVVLVTHKLQYLPHADWIIAMKDGTIQTEGTLKDIHKSEPELFEQWK
ALMNRQDQEFEKETVAEGMTVLERKNLRRAMYSREAVKTEEEEEEETVESDDEDNLSQAM
RHRTTIPWRSCGKYLSSAGLLLLPLLLLSQLLKHTFMVSIDVWLAHWTSDVIHAKINAVR
HNCTLVQDCGFSHSSYLLMFSVLCCLGIALCLVTSVAVEWTGLSVAKELHHNLLNNIILA
PMRLFETTPLGSLLNRFSADTNTIDQHIPTTLECLIRSTLLCVSALGVISYVTPVFLIAL
TPLAIACYFIQKYFRVAFKDLHQLEDSTQLPLLSHFSETVEGLTTIRAFRYEARFQQRLL
ELTDANNVASLFLTAANRWLEVRMEYIGACIVLVAAVASITNNLYNHLSTGLVGLGLTYA
LMVSNYLNWMVRNLADIEVQLGAVKRINNLLKTEPENYEGLLSSSQVPEGWPQHGEIHIQ
NLSVRYDSTLKPVLKHANANIRPGQKVGICGRTGSGKSSFSLAFFRMVDAFEGRIIIDDI
DIAKLPLQTLRSRLSIILQDPILFSGTIRFNLDPEMKATDSMLWEALEIAQLKPLVQTLH
GGLDAMVTEGGENFSQGQRQLFCLARAFVRKSSILIMDEATASIDMATESILQKVVMTAF
ADRTVVIIAHRVHTILNADLVMVMKRGEILEFDKPKVLLSTEGSAFASFVRADK
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgatttcccgctacagaccgagcccagactgcaccatgtccctgtctttctgtggcagt
gagaacaactccatcgcctacaatgtggatcgtggcgtgctcaacaatggatgctttctc
gatgccctcactgtggtgccccatgtcttcctgctcttcatcaccttccccatcctcttt
attggttggggcagccagagctccaaggttcacatccatcacagtacatggcttcatttc
cctggacacaacctgcgctggatcctcaccttcatccttctgtttgtgctggtgtgtgag
atcgcagagggcattgtctctgatgggtttacacagtctcttcatctacatctctacatg
cctgcatccttggctttcatggctgctatcacttctataatctactaccacaacatagag
acctccaattttcccaagttgttgctagcgttgcttatttattggaccttggcattcatc
actaaaactatcaagtttgcaaagtacacagagcacggcattggtatgagacagttgcgc
tattgcttgaccggcctcctcgtcctgctctacggcctgctactggctgtggagttcaat
gtcatactggggcggcgctatatgtgttttgcccatcccactgaggtaaagcctcctgaa
gaccttcaggacctgggtgtgcgttttctgcagccattcgtcaatctgctctctaagggt
acatactggtggatgaacacttttatcacctctgctcacagacgtcccattgacctgaag
gtcatcggcaaactgcccattgccatgagggcactcactaattatttgaaactgcgcaag
gcctttgaagctcagaagaggcctgatggccttcagcggcagggacctcaatggatctgg
agggctctacgtgaggcctttgggaaacccttgatcctgagcattaccttccgtttcctg
gctgaccttctgggttttgctgggccattgtgcatctcgggtattgtgcaccacatcagc
aagaagaaccacaccatccaggcaccggcacaattattgggggtctatttcatctcctcg
caggagtttcttgctaatgcctatgtactggctgtgttactgttcttcgcattgcttctt
cagaggacatttctacaagcctcctattatgcagcgatacaaactggcatcaacctgaga
ggagccatgcagacgaagatttacaataagatcatgcgtctgtgcacctccaacatgtct
atgggggagatgacagtgggccaaatctgtaacctagttgcaatagacaccaaccagttg
atgtggttcttcttcctgtgtcccaacctgtgggccatgccagtacagattgtagtgggg
gtgattctgctctactaccttctgggaataagtgccttgatcggggcaaccatcattgcc
ctcctggctcctgtgcagtactttgtggctaccaaattgtcccaaacacaaaaaactacc
ctggagtactccagtgagcggctgaaaaaaaccaacgagctgttacgtggtatcaagctg
ctgaagctctactcgtgggagcacatcttctgttccagtgtggaggagaccaggggaaaa
gagctgaccagcctgcaggcctttgctgtctacacctccatctctatattcatgaatgca
gctataccaattgcagcagttcttactacatttgtggtccatgtgcacctgtctgatgat
gcagatttatccccagctgtagcattcgcctcgctctcccttttccacatcctggtcaca
cctctcttcctcctgtccagtgtggttcgctccacggtcaaagcccttgtcagtgtgcag
aagctaagtgagttcttctccagtgatgagatcggagaagagcaagagcctaaggccacc
attccagcggtctccaccaaccacagcaattaccaagcccttccactgaaagttgtgaac
cgtaagcatccagtgagggatgagtggaacagctttgggctaaagagtgagcagtacatt
gaagcagcagcagtggaggatgaagatatctgcatcaaaataaacaatggatatttcagc
tggactgatggagcacccacactctccagtgtgaacataaagattccattcggtcagctg
actatgatagtgggtcaggtgggctgtggaaaatcttctctgttactggctgcactggga
gagatgcaaaggatctctggcactgtgacgtggaacaggaaatggtcttcagatggttgc
aggggacaatctgtgaatctgggatgtagcaggaaaccttccattattccaaagctggat
tcagagggagatgaaagtccagatgtgcccggtgatgaagaattccggaaaagatgtgct
gttgcatatgcttcccagaagccctggcttcttaatgcctctgtggtagagaacatcact
tttgaaatgcctctgatcaaacaaaggtataagacagtgatcgaggcatgctcccttcag
ccagatatcgacatcctaccacagggtgaccagacggagattggtgaaaggggaatcatt
ctctcaggaggccagaggcagcgtatcagtgtggcccgtgccctttatcagaccaccaat
gtagtcttcctggacgacccattctcagcgctggacatccatctgagtgatcacctgatg
caggagggtattctgaaactgctccgagaggagaagaggaccgtggtgctggtcacacac
aaactgcagtacctgcctcatgcagactggatcattgcgatgaaggatggtacgatccag
acagagggcacgctgaaagacatccataaatctgagccggaactgtttgagcaatggaaa
gccctcatgaatcgccaggaccaggaatttgagaaggagaccgtagcagagggtatgaca
gtattggaaaggaagaacctgagaagggccatgtactccagagaagcagtgaagacagag
gaagaagaggaagaggagacggtggagagtgatgatgaggataacctgtcacaggcaatg
aggcacagaaccaccatcccttggcgttcatgtgggaagtacctgagctcagctggtctg
ctgctgctgcccttattgctgctgtcccagctcctcaaacacacgttcatggtgtccatc
gatgtctggcttgctcactggacctccgacgtcatccatgctaagatcaacgctgttcga
cacaactgcacattggtgcaggattgtgggttcagtcactcgtcgtatctgctgatgttc
agtgtgctgtgctgcctgggcattgcgctgtgtttggtcacgtctgtggctgtggagtgg
acagggctgagtgtggccaaagagctacaccataacctgcttaataacatcatactcgcc
cccatgagactctttgagacaactcctttgggaagccttctgaaccgattctctgctgac
acaaacacaatagaccagcatattcctactaccttggagtgtttgattcgctccacattg
ctgtgtgtgtctgcgctcggtgttatctcatatgtcacacctgttttcctcatcgctctc
actccacttgccattgcctgctacttcatccagaaatacttcagagtggcgttcaaagat
ctgcatcagcttgaggacagtacccagcttcctttactctctcacttctctgagacagta
gagggtctcaccaccatccgggccttcaggtatgaagccagatttcagcagagacttctg
gagctcacggatgctaataatgtcgcatctctcttcctcactgctgccaaccgttggctg
gaggtccgcatggagtatattggagcctgcattgtccttgtagctgcagtggcctccatc
accaacaatctttacaaccatctgtccactggcctggtggggctgggactgacctatgct
ctgatggtatcgaactaccttaactggatggtgcgtaacttggctgatatagaggtccaa
ttaggagcggtgaaaagaataaacaacctgctgaagaccgagccagagaactatgagggg
ctactctcttcatctcaggtccctgagggctggccacagcacggtgagattcacatccag
aacttgagtgtaaggtacgacagcacactgaagccggtcctaaagcatgccaatgccaac
atcagaccaggacaaaaggtcggcatctgtggcaggacaggaagtggaaagtcgtctttc
tccttagctttcttccgtatggtggatgcctttgagggacggataatcatagatgatatt
gacatagcaaagctgcctcttcagacactgcggagccgtttatctatcatccttcaagat
cccattctctttagtggaacaatacgttttaatctagacccagagatgaaggctacagac
agcatgctttgggaagctctggaaattgcccaactcaaaccactagtgcaaaccctgcat
ggaggacttgatgccatggtgacggaaggtggggagaatttcagtcagggacaacgtcag
ctgttctgcctggcccgagcttttgtgcgcaaaagcagtattctgattatggatgaggcc
actgcctccatagacatggccacagagagtattctacagaaagttgtaatgacggccttc
gctgacagaacggtggtcattatagcgcatcgagtgcacaccatcctgaacgcagatctg
gtgatggtgatgaaaaggggggagattctggagtttgataaacccaaggtccttctcagt
acagagggaagcgctttcgcctcttttgttcgggcagacaaatga
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