Ictalurus punctatus (channel catfish): 108274983
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Entry
108274983 CDS
T04658
Symbol
amfra
Name
(RefSeq) autocrine motility factor receptor a
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04137
Mitophagy - animal
ipu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108274983 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108274983 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108274983 (amfra)
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
108274983 (amfra)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108274983 (amfra)
Multi subunit type E3
ERAD complex
108274983 (amfra)
LMBR1L-GP78-UBAC2 complex
108274983 (amfra)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf_RING_Vps8
zf-C3HC4_4
zf-RING_Vps41
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
108274983
NCBI-ProteinID:
XP_017340960
Ensembl:
ENSIPUG00000023007
UniProt:
A0A2D0SFD9
W5UG90
LinkDB
All DBs
Position
14:14600806..14612324
Genome browser
AA seq
622 aa
AA seq
DB search
MPLVFLERFPWPSLQTYTALSAVLLAGTLLNAYTAVTETATPAAEETQTNPVDNISDGNV
ATDILPYLISDSLFVWVLVNTACCVLMLIAKIIQCIVFGPLRVSEKQHLKDKFWNFIFYK
FIFIFGVLNVQTVEEVVLWCLWFAVLIFLHLMVQLCKDRFEYLSFSPTTPMSSHVRVLAL
LVSMLLCCGGLAVLCGLVGHLHGMHTVAFMAAECLLVTVRTGHVITRYSIHLWDLNHEGT
WESKGTYVYYTDFIMELTLLCLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRI
RRHKNYLRVIDNMESRFAVATPDELVANNDDCAICWDSMTSARKLPCGHLFHSSCLRSWL
EQDTSCPTCRMSLNINDGVREEGQRAPADGNMAAVPGNDVRPHLNHFFHFDGSRIASWLP
SFSVEVMHTTNILGIAQVNNSQLSAMAHQIQEMFPQVPYHLVLQDLQLTRSVEVTTDNIL
EGRIQVPFPAQPLDRAPVQVSQAPGEPAGASGGSEPATAETEDLEVRGSRFSKSADERQR
MLRQRKEELLLRARRRYLNKSDIKEASSFSVAAYNEEEDEEEDDVPSSFEEDDSSSDSLT
MRRRVLAAAAERRLHRQADAPI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcctctggtgtttctggagaggtttccttggcccagtttgcagacttacaccgctctg
agtgcagtgctgctggctgggactttgttaaatgcctacacagctgtgacagagactgca
actccagctgctgaagaaactcagaccaaccctgtagacaacattagtgatggaaatgtg
gccacagatatactgccttatctcatctcagacagcttgtttgtttgggttctggtgaat
acagcatgctgtgtcctcatgctgatcgccaaaattatccagtgcatcgttttcggtcct
ctgagggtcagtgagaaacagcacttaaaggacaagttctggaacttcatcttctataaa
ttcatcttcatatttggagtgctgaatgtgcaaactgtggaagaggtggtgctgtggtgt
ttgtggttcgctgttctaatcttcctccatctcatggtccagctctgtaaagatcgcttt
gaatatctgtccttttctccgacaactcccatgagcagtcatgtgcgagtgctggccctg
ctggtgtccatgctgctgtgctgtggaggtctagctgtgctctgtggccttgttggccat
ctccatggcatgcatactgttgcctttatggctgctgagtgtttacttgttacagtgcgc
actggacatgttattacgaggtactctattcacttgtgggatctgaaccatgaaggcact
tgggagagcaaaggcacctatgtctactatactgacttcattatggagctcaccctcctc
tgccttgacctgatgcatcacatccacatgctgctctttggaaatatttggctgtctatg
gccagcctggtgatctttatgcagcttcgttacctctttcatgaggtgcagagaagaatc
cgccgccacaagaactacttgcgtgtcattgacaatatggagtccagatttgcagtagcg
accccggatgagcttgttgccaataacgatgactgtgcaatctgctgggactcaatgacc
tcagcacggaagctgccctgtggacaccttttccatagttcatgtcttcgatcatggttg
gagcaggacacctcctgtccaacatgccgcatgtcactgaacattaacgacggtgtgaga
gaggaggggcagagggcaccagccgatggcaacatggctgcagtgcctggaaacgatgtc
cgacctcacctcaaccacttctttcactttgatggctcacgaattgctagctggctcccg
agcttttctgtggaagttatgcatacaaccaacatcctgggcatcgcacaggtcaacaac
tcacagctcagtgccatggcccatcagatacaggagatgttcccccaggttccttaccat
ctggtgctgcaagatttgcagctcactcgctctgtggaggtcaccactgacaacatcctg
gaaggcaggatccaggtgcccttccctgcccagcccctggaccgagcacctgttcaggta
agccaggcaccgggtgagcctgctggagctagcgggggttcagagcccgccactgcggag
acagaggaccttgaggtgcgtggcagccgcttctcaaaatctgcagatgagagacagagg
atgctgcgtcagagaaaagaggagctgctgctgagagcgcgcagacgttatctaaacaaa
agcgatataaaagaggcttcctccttctctgttgctgcctacaatgaggaggaggacgag
gaggaggatgatgtcccttcctcttttgaagaggatgactccagttcagactctttgacc
atgcgccgcagggtgctagcagctgcagccgagcgacgtttgcacaggcaggcagacgca
cccatctga
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