Ictalurus punctatus (channel catfish): 108275024
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Entry
108275024 CDS
T04658
Symbol
fbxw11a
Name
(RefSeq) F-box and WD repeat domain-containing 11-A isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04114
Oocyte meiosis
ipu04120
Ubiquitin mediated proteolysis
ipu04218
Cellular senescence
ipu04310
Wnt signaling pathway
ipu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108275024 (fbxw11a)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108275024 (fbxw11a)
04340 Hedgehog signaling pathway
108275024 (fbxw11a)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
108275024 (fbxw11a)
04218 Cellular senescence
108275024 (fbxw11a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108275024 (fbxw11a)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108275024 (fbxw11a)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108275024 (fbxw11a)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
108275024 (fbxw11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
F-box-like
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
NBCH_WD40
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
F-box
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_VPS8
Beta-prop_WDR11_2nd
PEP5_VPS11_N
WD40_2
DUF1513
DUF4508
Motif
Other DBs
NCBI-GeneID:
108275024
NCBI-ProteinID:
XP_017341050
Ensembl:
ENSIPUG00000008770
UniProt:
W5UMP1
LinkDB
All DBs
Position
14:8854427..8928145
Genome browser
AA seq
567 aa
AA seq
DB search
MEPEMEDKTLELMCSLPRSLWLGCSSVAESLCALRCLQSLPTSRAHNQNLTVMESQNLTD
DLSPKKTTVFKLGNGTLSGSRKRLSRATFEKEKEMCIQMFEQWSEADQVEFVEHLISRMC
HYQHGHINSYLKPMLQRDFITALPARGLEHIAENILSFLDARSLCAAELVCREWHRVISE
GMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTNEVPPNSYYHSLYPKIIQDIETIE
ANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKHTLECLKILTGHT
GSVLCLQYDERVIVTGSSDATVRVWDANSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDR
SIAVWDMASATDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN
GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGA
YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFL
NVSPNGQPDGVPHAARSPSRTYTYISR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagatggaggacaaaaccctggagctgatgtgctctttgcctcgctctctt
tggctgggttgttcctcggtggcagagagcctatgtgctctcaggtgcctgcagagcctc
cccacctcccgggcccacaaccagaacctaactgtgatggagtcgcagaatctcactgac
gacctctcgccaaagaagacgacagtttttaagctgggaaatggtactctgtctggctcg
aggaaacgtctgtcacgtgccacctttgagaaggagaaggagatgtgtatccagatgttc
gagcagtggtccgaggctgatcaggtggaatttgtggagcatctcatctcacgcatgtgc
cattaccagcatggccacatcaattcttacctcaaacccatgctacagagagactttata
acagccttgccagcgcggggtctggagcacatagcggagaacatcctgtcctttctggat
gcccgctctctgtgcgcggctgagctggtgtgtcgcgagtggcaccgggtcatctccgag
ggcatgctgtggaagaagctcattgagaggatggtgcgcactgatccactgtggaaaggc
ctgtctgaaagacatcagtgggagaagtacttgttcaagaaccgcacaaatgaagtccca
cccaactcgtactatcactcactctaccctaaaattatacaggacatcgagacgattgag
gccaactggcgctgcggcagacacaacctgcagaggatccagtgcagatcagaaaacagc
aaaggggtttactgcctacagtacgacgatgacaagatcatcagcggcctccgagacaac
tccattaagatctgggataagcacactctggagtgtctgaagattctgaccggtcacact
ggttcagttttgtgtctgcagtatgatgagagggtaatagtgactggttcctcagacgct
actgtcagggtttgggatgcgaattccggtgaggttctgaacactctgatccaccacaac
gaggcggtccttcacctgcgtttctgtaatggcctgatggtgacgtgctctaaggatcgc
tccatcgcagtgtgggacatggcctctgccactgacatcagcctgcgtcgcgttctcgtg
ggccacagggccgccgtcaacgtcgtcgacttcgatgacaaatacatcgtctccgcctcg
ggagacagaactataaaagtgtggagcactagtacctgtgaatttgtccgaacactaaat
ggacacaagagaggtattgcctgcctccagtacagagacagactggtggtcagcggctcc
tcggacaacaccatacgattgtgggatattgagtgcggggcatgtctgcgagtgttggaa
ggccatgaggaacttgttcgttgtattcggtttgacaacaagaggatcgtcagtggagca
tatgacggcaagattaaggtgtgggatctgcaggctgctttggaccctcgtgctccagcc
agcactctctgtctgcgcacgctagtggagcactctggccgtgtgttccggctacagttt
gatgagttccagatcatcagcagttcccatgacgacacaatccttatatgggacttcttg
aatgtctcccccaacggacagccagacggagtcccacatgcagccagatcgccctcgcgc
acctacacgtacatctccagatag
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integrated database retrieval system
