Ictalurus punctatus (channel catfish): 108275041
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Entry
108275041 CDS
T04658
Symbol
irx5b
Name
(RefSeq) iroquois-class homeodomain protein IRX-5b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108275041 (irx5b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108275041 (irx5b)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
108275041
NCBI-ProteinID:
XP_017341087
Ensembl:
ENSIPUG00000022999
UniProt:
A0A2D0SED5
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Position
14:complement(14630295..14634088)
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AA seq
419 aa
AA seq
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MSYPQGYLYQASTPLALYSCPSYGSSALAAPRADELSRGNSSSGSAFAPYAGSTAFTSQT
PAFNSLQYGSEPASAPQFSSFAGSPYEPSPGLAASLGYAHPYGAPLGAFPLGDPAYRKNA
TRDATATLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEDEEDNIDLEKNDDEDEPIKAAEMAESTKELGLPVNPGLITTEKHTEHTDDEA
DRVTDTSALREGEPRAGCDSSSPTTSSLQSERVGPETPADQGDTPSAVKPSGESGLGTSV
IHSTNPAPKPKLWSLAEIATSDKPGSERLQTCGAAQSPVIISTGTFSPSRSPTRGPLLPR
HFYYASAFYPAFTNYSAFGPAGRASSSGLSEAALHRAARGNTPADMCKELAQGEAHCKR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcataccctcagggctacttgtaccaggcgtccacccctctggctctctattcgtgt
ccttcatacggctcgagcgcgctggcggcgccgcgtgcggatgagctgagcagagggaac
tccagctccggctctgcgtttgcaccgtacgcgggatctacagctttcaccagccaaact
ccagccttcaactcgctccagtacggctcagagcccgcatccgcaccacagttctcctca
ttcgcgggttccccgtatgagccgtccccgggtctggccgcctctctgggttacgcgcac
ccgtacggagcgccgctgggcgcgttcccgctcggagaccccgcgtaccggaagaacgcc
acgcgggacgccaccgcaacgctgaaggcctggctcagcgaacacaggaagaacccgtac
cccaccaagggggaaaagataatgctggccatcatcaccaaaatgactcttacccaagtg
tccacctggtttgccaacgcgcgcagaagactgaagaaggagaacaagatgacgtggaca
ccacggaacagaagcgaggacgaagatgaagaagataatatcgatttggaaaaaaatgat
gacgaagatgagccgattaaggcagccgaaatggcagagtcgaccaaagaattaggcctt
cccgttaatccaggattaatcacgaccgagaagcacacagaacacactgatgatgaagcg
gatcgtgttactgacacttccgctctgagagaaggtgagcctcgggctgggtgcgactct
tcatcacccacgacctcctctctccaaagcgagagagtcgggccagagacacccgcagat
cagggagacactccgagcgcagtgaagccttccggagagagcggccttggcacatctgtc
attcattccacgaacccggctcccaaacccaaactgtggtctctggccgagatcgccacg
tcggataaaccgggtagtgagcggctccaaacatgcggagccgctcagagtccggtcatc
atcagcacgggcacgttctcgccctccaggtcgcccacacggggtcctctcctccccagg
cacttctactacgcttctgctttttatcccgctttcacgaactacagcgcgttcgggccg
gcgggccgcgcctccagctccggattaagcgaagcggcgctgcacagagcagccagagga
aacacaccggccgacatgtgcaaagagctggcacagggggaggcgcactgcaagcgttaa
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