Ictalurus punctatus (channel catfish): 108275042
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Entry
108275042 CDS
T04658
Symbol
irx3b
Name
(RefSeq) iroquois-class homeodomain protein IRX-3b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108275042 (irx3b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108275042 (irx3b)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
108275042
NCBI-ProteinID:
XP_017341089
UniProt:
A0A2D0SEE3
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Position
14:14698620..14701392
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AA seq
369 aa
AA seq
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MALPQLGYKYVRALYPTDRAGMLAGRVGAELSPTSSISNSLSMYGSPFSASQAYSAFLPY
SSDISVLNHLASPYELKESPGMQHPGFPAAHPAFFPYSQYQYGDASRPKNATRESTSTLK
AWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWVPKTQPDEEG
NVYPSDNEGEEEDKRDDDDDDEEIDLENIDTENIENKEDSDCRDELRSDSKITETDRSDS
DTSEGFEDTQGQEKSFVKNSGMKDRDSCADGQRDEDRKSPTAEPLRNLNPAQKPKIWSLA
ETATTPDHPKKSAVMSRTAVQSSVGNMHNWTKMAISAQQLALTHHYFGLKQPSNNVMINK
YADARTHAL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggctctcccgcagctcggctataagtatgtgagagcgctgtatcccactgatcgggcc
ggaatgctggcgggccgtgtgggtgccgagctcagtccgaccagcagcatctctaactcc
ctctctatgtacggatctccgttcagcgctagccaggcatacagcgccttcctgccctac
tccagcgacatctccgtgctcaaccacctggccagtccatacgagctgaaagagagtccc
ggcatgcaacaccctgggtttcccgctgcgcacccagctttcttcccttacagtcagtat
cagtatggagatgcgtcccgacccaaaaacgctacccgcgagagcacaagtacactgaag
gcctggctgagcgaacacaggaagaacccatatcccaccaagggcgagaagatcatgctg
gccatcatcaccaaaatgaccctcacccaggtgtccacctggttcgccaacgcgcgcagg
agactgaagaaggagaacaagatgacctgggtaccaaagacacaaccggacgaggaggga
aacgtttaccccagcgacaacgagggtgaggaggaggacaagcgggacgacgacgacgac
gacgaggagatcgacctggagaacatcgacacggagaacatcgaaaacaaggaggactcg
gactgtcgggacgagctcagatcggattcaaaaatcacggaaacggacaggagtgactca
gacacgtccgaggggtttgaggacacgcagggacaggagaaaagttttgtaaaaaacagc
gggatgaaagacagagatagctgcgcggacggacagagggacgaggacaggaaaagcccc
acagcagagcccttgaggaatctaaacccagcacaaaagcccaaaatttggtctttggcc
gaaacagcaacgacaccagatcatccgaaaaagtctgcagtaatgagcaggactgctgtg
cagagctctgtggggaacatgcacaactggacaaaaatggccatttctgctcagcagctc
gcattaacacaccattactttggacttaaacagccgagcaacaacgttatgattaacaag
tacgcagacgccaggactcacgccttatga
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