Ictalurus punctatus (channel catfish): 108275050
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Entry
108275050 CDS
T04658
Symbol
nr3c1
Name
(RefSeq) glucocorticoid receptor isoform X1
KO
K05771
glucocorticoid receptor
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108275050 (nr3c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108275050 (nr3c1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108275050 (nr3c1)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
108275050 (nr3c1)
Nuclear receptors [BR:
ipu03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
108275050 (nr3c1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCR
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
108275050
NCBI-ProteinID:
XP_017341094
Ensembl:
ENSIPUG00000010081
UniProt:
A0A2D0SEE8
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Position
14:7091619..7140227
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AA seq
757 aa
AA seq
DB search
MEQGGVKNGAKRDEHLMTRSFSESPAEGVLQNGARDTMSFAPTTVVPPVSPLLQPVTGDL
PNGVNNTPSPEDITINLPSPLELFVEDPDLKMVGKDLRSQQSFQQQSSLELYSLGDNFSR
LEASIADLNSSLTSVDSLIGGGDPTLFPLKNEDFSPMGKGEMDLDQDPFGKDVDGSNPKL
FGENTMDLLEEFDLPESPTDLYLGDDEFPPIADDALLGVMVSDKDSKSVDSLSTSTIANV
NGGASSTPSSVSTSSPVLVIKQEKEPMIQLCTPGVIKQENASGRSFCQMTADLPSPVRNV
SIAICGVSTSSGQSYHFGSPVSSGSQQKDQKPVFNVYTPQPTGNEWGQGFGNASAMQQRA
SNSFTATQSFSTNYTGSTARPEANTATSSATGKASGTHKICLVCSDDASGCHYGVLTCGS
CKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRFRKCLMAGMNLDARKSKKLKMKG
VQQTNTAEVTPPPAPEARSLVPKAMPQLVPTMLSLLKAIEPETIYAGYDSTVTDTSTRLM
TTLNRLGGRQFVSAVKWAKALPGFRNLHLDDQMTLLQSSWLFLMSFGLGWRSYQQCNGSM
LCFAPDLVINEERMKMPYMGDQCAQMLKISNEFGRLQVSNEEYLCMKVLLLLSTVPKDGL
KSQAVFDEIRMSYIKELGKAIVRREENSSQNWQRFYQLTKLLDSMHDMVGGLMNFCFYTF
VNKSLSVEFPEMLAEVISNQLPKIKAGSVKPLLFHQK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggagcagggaggcgtgaagaacggcgcgaagagagatgagcatttgatgacgcggagt
ttcagcgagagcccagctgagggagttttgcagaacggagcacgcgacaccatgtcattt
gccccgactactgtagtgcctcctgtcagccccctgttgcagcccgtgactggagatctc
cccaacggcgtgaacaacacgccctctccagaggatatcaccatcaatttaccatcccct
ctggagctctttgtggaggaccctgacctgaaaatggttgggaaggacttgaggtctcag
cagtcctttcagcagcagtcctcccttgagctctacagcttgggggataatttctcacgt
ctggaggccagcattgctgatctcaacagctccttaacgtccgtggactctttaatcgga
ggaggggaccctactctgttcccactgaaaaacgaggacttctcaccaatggggaaaggg
gaaatggatctagatcaagatcctttcgggaaagacgtggacggcagtaatccgaagctc
ttcggcgagaacaccatggacctcctggaagagttcgacttgcccgagtcgcccacagat
ctatacttgggagacgacgagttcccgccgatagcagacgacgctctgctaggagtcatg
gtttccgacaaggactccaagtctgtggactcgctgagcaccagcaccatcgccaacgtc
aacggcggcgccagctcgactccttccagtgtgtccacaagcagcccagtcttggtgatc
aagcaagagaaggagcccatgatccagctgtgcactccgggcgtgatcaagcaggagaac
gccagcgggaggagcttctgtcagatgaccgcagacctgccgagcccagtcaggaacgtt
tccattgccatctgtggcgtcagcacgtccagcggccagagctaccacttcggaagccct
gtatccagcggcagccagcagaaagatcagaaacctgtttttaacgtgtacacaccgcag
ccgacgggcaacgagtggggccagggattcggaaacgcaagtgcgatgcaacagagagcc
agcaacagcttcaccgccacccagagcttcagcaccaactacaccggctcgactgccagg
cccgaggccaacaccgccacatcctcggccacagggaaggccagcggcacacacaaaatc
tgcctggtgtgttcagatgatgcatcaggctgccactacggagttctcacctgcggcagc
tgcaaggtcttcttcaaaagagccgtggaagggcaacacaattatctgtgcgccgggcga
aacgactgcatcatcgacaaaatccgcaggaagaactgtcccgcgtgccgtttccgcaag
tgcctcatggccggcatgaacctggacgcacgtaaatccaagaagctgaagatgaaaggt
gtacagcagacgaacacggccgaggtaactcctcctccggcgcccgaggcgcgctcgctg
gtgcccaaagccatgccgcagctggtgcccaccatgctgtcactgctcaaagccatcgag
cccgagaccatttacgccggctacgacagcacagtcacagacacctccacgcggctcatg
accaccctgaacagactgggagggcgccagttcgtctccgctgtcaagtgggccaaagct
ctgcccggtttccgaaaccttcacctggatgatcagatgactctgctgcagtcctcctgg
ctcttcctcatgtcgttcggtttgggctggagatcttaccagcagtgtaacggcagcatg
ctgtgtttcgccccagacctggtgatcaatgaggagaggatgaaaatgccctacatggga
gaccagtgtgcccagatgctgaagatttccaatgagtttgggagactgcaggtgtcgaat
gaggagtacctgtgcatgaaggtgcttctgctgctcagcacagtgccaaaggacggtctg
aagagccaggctgtgttcgatgagatcaggatgtcgtacattaaagaactgggaaaagcc
atcgtgaggagggaagagaactccagccagaactggcaacgattctaccagctcactaag
ctactggactccatgcacgatatggtgggtggactgatgaacttctgcttctacacgttt
gtgaataagtctctgagcgtggagttccccgagatgctcgccgaggtcatcagcaaccaa
ctaccaaaaatcaaagccgggagcgtcaagccgctgctctttcaccagaaatga
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