Ictalurus punctatus (channel catfish): 108275051
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Entry
108275051 CDS
T04658
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108275051
Membrane trafficking [BR:
ipu04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
108275051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
108275051
NCBI-ProteinID:
XP_053541603
UniProt:
A0A9F7RQK4
LinkDB
All DBs
Position
14:23666377..23704990
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AA seq
1446 aa
AA seq
DB search
MVSEEDFSKEVLESVQDAVGRQLKLSLRKKVQLEGKGDKQDIRILALAPHRAFLLSARVP
ARIEQSFNFFDIQAVGSSRPGQLVVDYDKGQLCVKLSSNEEVDEVIAQMGVSIQEHCPGL
NPLRVMKKLSLKPAERTTSLQAFWENNPPPDTGPCGAFSRMYWCVCDQMGLPYRAEVQWD
VDTIYLTQDTKELNLQDFIHLETRDLMAIVAVLEYNQWFTKISLKDYKLSTDLCDQILRV
VARSSRLEELALENTGLKADFAQKLASALSQNPHSALHTLNLANNSVEDKGIASLSSPLG
KLSSGLKHVNLSKNSLSAKGVNILAQSLCSNSSFFNTLKHLDLSGNTLRGDDLANLWNFL
SQPNSLHTLDLSSCDCALDLVCSSLLRGSLKHLSVLNMSKSVLSIKKGKELPSSFKQFFG
SALALNTIVLSGTKLPPEALKALLLGLACNPNLKEVSLDLSSCELRSAGAQILEGCIAEM
PNVSSLDISDNGLDSDLTTLLVWLAKNRSIRQLSLGKNFNNIKSKNLGQVLNNLVLMIQE
EESPLSSLSLADSKLKADLSMVLNAVGGNSSLTRLDISGNGMGDMGAKMLAKALQINTKL
RTVIWDRNNVSAQGLQDVAAALEKNYTIRFMPVPIMDAAQALKSSPEKTEDALMKMEQYL
LRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRLCVKVQDHLNSLRFSEREKVQEDMKAAE
RLVQDARNSKRLLASMYQLRSARRRGRDGGEDAEGGGGDGEGGGACEAVESPWVAPIQDK
LQSMAGEVSTVINQQLQSLLVSMVDTAESVCPHVMHTANLRPSLMRVSEGKMSVPRTFIT
NTLLEQSAIDIINKISEVKLSVASFLSDRIIDEILESLSHSQRTLAEHLSRRGQPMIHHN
SEESEVLEEEQLDPKNLPSPSSDILLSPTSKRQSILFRMVRPISVAFELEFDLDKALEHV
PIHMEDPPVPPPHEPVEAGLERPGSVCFIDLPETESPKLQHMTKLRPRRKKTNTKPRKAA
STATADVEQTEFVGKVDEGLDDFFAKKVTKIGTNRRSTIKDAGQEGEKKRESRMSGFFNL
IKSRTSLKSPPTSPHTPTPAPTITESDNVESTTPAVKSPIPEHTQEPIKTQVPEKVEPCE
PVDTAMTSESKGHVEESKKKEAPPGGRIRGVQVMGNDFLAQLRAKQEKMKDKTSDSSSAN
KADSNHADGDSAAVEKPAQKEHHQEAVSKSPSHSTHLLKPTAPAPASAAKHTPPATHTGL
KASLSPPSSNPKSTPSSHEEHHPSQEHLPHSSSTPANDASGHLGDVFSTKQSATAQHQKE
ESSKTETEEHICVSPGLPPIVLDPAAEGSVFEPESYTQPSHTAAAGQCCASLHSSSSTSA
AEEKDDRQRTVSLPAQVDLLTPTDSTSSPEPADSSSTYTHLPSSAALQHTDPTQGDLSTG
EDESVE
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggtctcagaggaggacttctcaaaggaagtgctggagagtgtgcaggatgcggtgggc
cggcagctcaaactgagcctgagaaagaaggttcagctggagggtaaaggtgacaaacag
gacatccgaatcctggctctggctccgcatcgggcttttctgctgtcagctcgagttcct
gctaggatagaacaaagcttcaatttctttgacatccaagcggtgggcagcagcaggcca
ggccagttggtggtggactatgataaaggacagctgtgtgtgaagctcagctctaatgag
gaggttgatgaagtcatcgctcagatgggagtcagcatacaggagcactgccccggactc
aacccactgagagtgatgaagaagttatctctgaagcccgctgagaggacgaccagtcta
caagcattctgggaaaataatcctccccctgatactggaccttgtggtgctttctctcgt
atgtattggtgtgtgtgtgatcaaatggggctgccttacagagcagaggtgcagtgggac
gtggacactatctacctcacccaagacacaaaagagctcaacctacaggactttatccac
ctggagaccagggacctgatggccatcgtggcagtgttggagtacaaccagtggttcact
aaaatctcactcaaggattacaaactgtctacagatttatgtgatcagatcttgagagtt
gtggctcgttctagcagattagaggagctggctctggaaaacacaggactcaaagctgat
tttgcacagaagttggccagcgctctgagccagaacccgcactcggctctacacacactc
aacctggccaacaactcggtggaggacaaaggaattgcatctctgagttctccactggga
aaactttcatctggactgaagcatgtgaatctttcgaaaaactccctctcagctaaaggt
gtgaacattctggctcagtctctgtgttccaactcgtccttttttaacacactcaaacac
cttgatctgtctggaaacacgctgaggggagacgacctggctaacctgtggaacttcctg
agtcagccgaacagcctgcacactctggacctgtccagctgtgactgcgctctggacctg
gtctgctcttctttactccgaggctctctgaagcatctttctgtcctcaacatgtccaag
agcgtcttgagtattaagaaaggaaaggagctgccctcctcctttaagcagttcttcggc
agtgctctggccctcaataccatcgtcctgtccggtaccaaactgcctccagaggccctc
aaagctctgttgctgggtctggcctgtaatcccaacctaaaagaagtctctttggatctg
agcagttgtgagctgcgttcagctggagctcagattctggaaggctgtatagctgagatg
cccaacgtctctagcctggatatttcagacaacggtttggactctgatctgacgactctg
ctggtgtggctggctaagaatcgctccatcagacagctgtctctgggcaagaacttcaac
aacatcaaatccaagaatctggggcaggtgctgaacaatttggttcttatgatccaggag
gaggaatctccactcagctctctgtccctggctgattccaagctgaaggctgatttgtcc
atggtgctgaacgctgtgggaggaaacagctccctgactcgcctagacatcagcggcaat
gggatgggagacatgggggctaaaatgctagccaaagccctgcagatcaacaccaaactc
aggactgtgatttgggacaggaataacgtcagtgctcagggtctgcaggacgttgcagct
gctttggagaagaactacactatccgcttcatgccagtgcccatcatggacgccgcacaa
gctctcaagtccagccctgagaaaaccgaggacgctcttatgaagatggagcagtatctc
ttgaggaaccatgaaacgaggaaatacctacaagaacaagcctacaggctacagcaaggc
attgtcacgtccaccacacaacagatgattgacaggttatgtgtgaaggtgcaggaccac
ctaaactctcttcgctttagcgagagagagaaggttcaagaggacatgaaagcagcggag
agactcgtccaggacgcccgcaactcgaaaagactcctggccagtatgtatcagctccgc
tcggcacgccgtagaggtagagacggaggtgaagatgcagaaggaggtggaggagatgga
gaaggaggtggagcgtgtgaggcggtcgagagcccgtgggtggccccgatccaggacaaa
ctgcagtccatggcgggagaagtcagcactgtcattaaccagcagctgcagagtttgttg
gtctccatggtggacacggcggagagtgtgtgtcctcacgtgatgcacacagcgaacctg
aggccgtctctgatgcgggtgagcgaggggaagatgagcgtgcctcgaaccttcatcacc
aacactctgctcgagcagtctgccatcgacatcatcaacaagatcagtgaagtaaagctc
agcgtggcctcgttcctgtccgaccgtatcattgatgagatcttagagtctctctctcac
tctcagcgcacactggcggagcatctgagtaggcgtggccaaccgatgatccatcataat
tcagaggagtctgaggttctggaggaggagcagctggatccaaagaacctgccatcacca
tcatctgacattctgctgtctccaacctccaagaggcagagcatcctgttccggatggtg
cgtcccatctccgtggccttcgagctggagtttgatttggataaagcactggagcatgtg
cccatccacatggaagacccgcccgttcctccaccccatgaaccagtggaggcggggtta
gagaggcccgggagtgtgtgtttcattgatctgccagaaacagagagccccaaactgcag
cacatgactaaactccgcccacgcaggaagaagaccaacaccaaaccgagaaaagcagct
agcactgctacagccgacgtggagcagacggagtttgttgggaaagtggatgagggcctg
gacgatttctttgctaaaaaagtcacaaagattggcaccaacaggcgttccaccataaaa
gacgccggtcaggaaggggagaagaagcgggaatctcgcatgagtggcttcttcaacctc
attaaatcacgcacctccctgaaatctccacccaccagcccacacacacccactcctgca
ccaaccatcactgaatctgataacgtcgaatccacaacgcctgcagtgaaaagccccatc
ccagaacacactcaagaaccaatcaagactcaggtaccggagaaagttgaaccatgtgaa
cccgtagatacagccatgacctctgagagtaaaggtcatgtggaggagagtaagaagaag
gaggcgccacctggggggcgaatccgaggggtgcaggtgatggggaacgacttcctggcg
cagctgcgggcaaaacaggagaagatgaaagacaaaacgagcgattcctcgtctgcgaac
aaagccgactctaaccacgcagatggcgacagtgcagctgtagaaaagccagcgcagaaa
gagcaccaccaagaggctgtatctaaatctccctctcattcaacccatctcctgaaacca
actgctcctgctcctgcttctgcagccaaacacacccctccagccacacacaccggcctc
aaagcctcactcagcccaccatctagcaaccccaaatccaccccgagcagccacgaagag
caccacccaagccaggagcaccttcctcacagctccagcacacctgccaatgatgcatca
ggtcacctcggcgatgtcttctccaccaagcaatctgcaacggctcaacaccagaaggaa
gagtcatctaaaacggagacagaggaacatatatgtgtctctcctggcttacctcctata
gtgctggatcctgcagcagagggcagtgtgtttgagccagaatcgtacacacagccatca
cacactgcagcagcaggacaatgctgcgcctcccttcactcctccagttccaccagcgct
gctgaagagaaagacgatcgacagcgcaccgtgtccctgcctgcacaagttgaccttctg
actcctacagactctacttcatctcccgaacctgcagattccagcagcacctacacgcac
ctcccgtcttctgctgcacttcagcacacagacccaacacaaggggatctctcaaccggc
gaggatgagagtgtggaataa
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