Ictalurus punctatus (channel catfish): 108275064
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Entry
108275064 CDS
T04658
Symbol
cd44b
Name
(RefSeq) CD44 antigen
KO
K06256
CD44 antigen
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108275064 (cd44b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108275064 (cd44b)
04090 CD molecules [BR:
ipu04090
]
108275064 (cd44b)
00535 Proteoglycans [BR:
ipu00535
]
108275064 (cd44b)
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108275064 (cd44b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108275064 (cd44b)
Exosomal proteins of other body fluids (saliva and urine)
108275064 (cd44b)
Exosomal proteins of colorectal cancer cells
108275064 (cd44b)
Exosomal proteins of bladder cancer cells
108275064 (cd44b)
CD molecules [BR:
ipu04090
]
Proteins
108275064 (cd44b)
Proteoglycans [BR:
ipu00535
]
Cell surface proteoglycans
Others
108275064 (cd44b)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Hyaluronan
Cell surface receptors
108275064 (cd44b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
PFF1_TM
DUF6480
Epiglycanin_C
Motif
Other DBs
NCBI-GeneID:
108275064
NCBI-ProteinID:
XP_017341117
Ensembl:
ENSIPUG00000024094
UniProt:
A0A2D0SEG6
LinkDB
All DBs
Position
14:13951519..13970293
Genome browser
AA seq
428 aa
AA seq
DB search
MWILLLGLTSGLLASSWASSVQEVKLRSCSYAGVFHIQGNYRYALDFEAAKKLCEVLGTT
LASNEEVTIAHGRGLESCRYGWISSGNITISRQVPNNLCAANMTGVITLVPTDSHYDAYC
YNQTDLSNRSCNFEIKSLGNDPAHPETSENIGRQVFNSTRIPAEHVYAMDSVELHTSRTV
TAVHDLTPPTVKTNPTANNSHDEPDVSGDVLDQNTQPPTMTTEPSGKYDDLTTESAEFTE
KNREEVADDTTTTFSLENIGSGMEEPIDATTSEPNTEGSKDKQEDHINYTSESPPAPTTE
VNSRQSVQSKGRKGPGIASSPEENTSSGSTKDWLVILIVIVAIVAIIILGAFVVTRNRWC
GRSQTLMITSKSSGEGNGTAASAASPEAQEREQEMVTLMNKEKIQENGNTEEFTVITLEE
SPEKNQEA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtggattctcctactcggactcacctctggattgctggcctcctcttgggcaagctct
gttcaagaggtgaagctacgatcctgcagttacgcgggagtattccatattcagggcaat
tatcgatatgctttggactttgaggctgctaagaaactatgtgaagtgctgggaacaacc
ttagccagtaatgaggaggtgactattgctcatggcaggggcttggagagctgcaggtat
ggctggatcagcagtggaaacatcaccatttctcgacaagtgccgaacaacctgtgtgcg
gctaacatgacgggagttatcactttggtacctacagattcccactatgatgcctactgc
tataatcagacagatctgtctaacagaagctgcaattttgaaataaaatctctggggaat
gatcctgcacatcctgagaccagtgagaacattggaagacaagtttttaacagcactaga
attccagctgagcacgtttatgcaatggattcagttgagttacacaccagtcgcaccgtt
acagctgttcatgacctaactcctcccacagtgaagacgaatcccactgcaaacaactct
catgatgagcctgatgtatcaggagatgtgctggatcagaacacacaacctcccaccatg
actactgaaccctctggaaaatatgatgatctgaccactgagagtgctgagtttacagaa
aaaaatagagaagaagttgcagatgataccaccacaacatttagcctagaaaacattggc
tcaggtatggaagagccaatagacgccaccacaagtgaaccaaacactgaaggctcaaag
gacaaacaagaggaccacataaattacacatctgagagtccaccagcaccgaccactgaa
gtgaattcacgtcagtctgtgcaatcgaaagggaggaagggacctggcatagcttcatca
ccagaagagaataccagcagtggcagcaccaaagattggttggtcatcttgattgtgatt
gtggccatcgttgctattattattctgggtgcttttgtggtaacaaggaacaggtggtgt
gggagaagccagactctgatgatcacctccaagagcagcggtgagggcaatgggacagca
gcatcagcggccagccccgaggctcaggagagagagcaggaaatggtgacgcttatgaac
aaagagaagatccaggagaatggcaacacggaggagtttactgtgatcaccctggaagaa
tcaccagagaaaaaccaggaagcatga
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integrated database retrieval system
