Ictalurus punctatus (channel catfish): 108275100
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Entry
108275100 CDS
T04658
Name
(RefSeq) trafficking protein particle complex subunit 9 isoform X1
KO
K20306
trafficking protein particle complex subunit 9
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108275100
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
108275100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC9-Trs120
Vps23_core
Porphyrn_cat_1
Motif
Other DBs
NCBI-GeneID:
108275100
NCBI-ProteinID:
XP_053541524
Ensembl:
ENSIPUG00000005309
UniProt:
A0A9F7REJ9
LinkDB
All DBs
Position
14:25559781..25806031
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AA seq
1147 aa
AA seq
DB search
MSVPDYLQCAEDHQTVLVLVQPLGAVPEDDFFIVYKRVASVSQVSVGDNQRSLSVRYRHH
YAPENGEWGEFQSHRRAVGLVAVAWCAAAGSEWALTSERFRAMKERLGPALYDSRLLAFG
LSGHATAELQRPDVAFFPGYDDCPELEKTIEDFIQSIFIVLESKRLDRATDKSGDKIPLL
CVPFEKKDFVGLDTDSRHYKKRCQGRMRKHVGDLCLQAGMLQDALVHYHMAVELLRSVND
FLWLGAALEGLCSASVIIHYPGGTAGKGGARKPLVSTAADGGKRHRPGAQEVLIDPGALT
SSSSISADTSSEIGRAKNCLSPEDIVEKYKEAISYYGKYKNAGVIELEACVKAVRVLAIQ
KRAMEASEFLQNAVYINLGQLSEEEKIQRYSVLSELYELIGFHRKSAFFKRVAAMQCVAP
TIPEPGWKACYRLLLETLPGYSLSLDPKDFSKGTHRGWAAVQMRLLHELVYASRRMGNPA
LSVRHLSFLLQTMLDFLSDQEKKEVTQSLENYTSKCPGGMNVITLPDGLKLAAVPLTKLP
IIRSVSLLNLPASLRPHKVKGLLGPNVSSASPFIYSPISIHNRGEERSKKIDFQWVQGDV
CEVQLMVYNPMPFELRVENMGLLTSGVDFESLPAALSLPAESGLYPVTLVGVPRTAGTIT
VSGYHTSVFGVSSDCLLDTLIGVKSSGCVVEVVPSLPRLQLTTSLPRSVCVGAEDLSSSV
CLQLFNGETQQLTITLENIGSETLNTLELSSRTLTTKEKLFGEFVSWDMEDALSRLPLKP
GQALTITVNIQARLDFSSQENLLQDLNDDGISVTGLPISSPLRQVLKPRPENKQANSDAS
KSEYNHVKTLECVLCFRYSGGPGHVDGYYRELSLGIRVDVEPSVFFTRVNTLPATSTRQC
HLLLDVFNPTEHELTLTARNQELVLHSNECQRMAIQVDKFDFESLPMPSHDAVHQSSVYE
REEEKQQQVQGGHINNTLQLRWTIPSLKRQGEASVEGVLTQLVLEHLQLTPLQWDIAVNG
KACDCDVVAECKVGDAVPLEVKLTNRSKSAVGPFSLTVVPFQDYQNGVQNYELQEAVTFI
GSNSFYIESVSPAGNSVCAGALLFLYTGDFYLNIKFQDDSTSRDLPPTWFCLPSVHIRAQ
EPIDAAA
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgccggattacctgcagtgtgccgaagatcaccagacggtgctggtgctggtg
cagccgctgggcgccgtgcccgaggatgacttcttcatcgtgtacaagcgcgtggcgagc
gtgtcccaggtgagtgtaggagacaaccagcgctcgctgtccgtgcgctaccgccaccac
tacgcccccgagaacggagagtggggcgagttccagtcgcaccgcagggctgtggggctg
gtggccgtggcttggtgtgcggcggcgggcagcgagtgggcgctcacgtccgagaggttc
cgcgccatgaaggagagactgggaccggcgctgtacgactcgcgtctgctggcgttcggt
ctgagcggacacgccaccgccgagctccagcgacccgacgtggccttcttccccggatac
gacgattgccccgagctggagaagaccatcgaggacttcatccagtccatcttcatcgtc
ctggagtccaaaaggctggatcgggctacggataaatccggggataagatcccgctcctg
tgcgtgccgttcgagaagaaggacttcgtcgggttggacacggacagcaggcactataag
aagcggtgtcagggccgcatgaggaagcacgtgggggacctgtgtctgcaggcgggaatg
ttacaggacgctctggtccactaccacatggccgtcgagctgctgcgctcagtcaacgac
ttcctctggctgggggctgctctggagggtctctgctcggcctcggtgataatccattac
ccaggaggcacggccggaaagggtggtgcacgcaaacccctcgtctccacggcagcggat
ggtgggaagagacaccggccaggagctcaggaggttctcattgacccaggtgctctgacc
tccagcagcagtatcagcgctgacaccagcagtgagatcggccgagccaagaactgtctg
agtccagaggacatcgtcgagaagtacaaagaggccatctcttactacggcaagtataag
aacgctggggtgatcgagttggaggcgtgtgtgaaagcagtacgagttttggccattcaa
aagcgagccatggaggcatcagagttcctgcagaatgccgtctacatcaacctgggccag
ctttcagaagaagagaagatccagcgctacagtgttctgtctgagctgtacgaactgatc
gggttccaccggaagtctgcgttctttaagcgcgtagcggccatgcagtgtgtggctcct
accatccccgagccaggctggaaggcttgttacaggttactgctggagacgctgcccggc
tacagtctctctctcgaccctaaagacttcagcaaaggaactcaccgtggctgggcggct
gtacagatgcgtttgctgcatgaactggtgtacgcgtcccggcgcatggggaaccccgcc
ctcagcgtccgccacctctccttcctcttacagaccatgctggacttcctgtcagatcaa
gaaaagaaggaggtgactcagagtctggagaactacacgtctaagtgtcccggagggatg
aacgtcatcacgcttccggacggactcaaactggctgcggtgcccttgaccaagctgccc
atcatcaggtccgtgtctctgctgaatctgcctgccagtcttcgtccacacaaagtgaag
ggtctgctcggaccgaacgtcagctccgccagccccttcatctactcgcccatcagcatc
cacaacagaggagaagagcgctccaagaagatcgatttccagtgggtgcagggggatgtg
tgtgaggtgcagctgatggtgtacaaccccatgcctttcgaactgcgtgtggagaacatg
ggtctgctgacatccggcgtggacttcgagtctctgcccgccgctctctctctccccgcc
gagtccgggctctaccccgtcactctggtgggagtcccgcgcaccgccggcaccatcacc
gtcagtggttaccacacgtcagtgtttggtgtgagcagtgactgcctgctggatactttg
attggtgtgaagtccagcggttgtgtggtggaggtggtgccgtcactgcctcgcctccaa
ctcaccacctccctaccacggtctgtttgtgtcggtgctgaggatctgtccagcagtgtg
tgtctgcagctgtttaatggagaaactcagcagctcaccatcacacttgagaacatcggt
tctgagactttaaacacactggaactgtcgtctaggacactcactactaaagaaaagtta
tttggcgagtttgtgagctgggacatggaggacgcgctgtctcgtctccccctgaagcca
ggccaggctctcaccatcaccgtcaacatccaagccaggctggacttctctagtcaggag
aacctgctccaggacctcaacgatgatggtatcagtgtgaccggactgcccatctccagc
cctctgagacaggtcctgaagccccgcccagaaaacaagcaagccaactccgacgccagc
aagagcgaatataaccacgtgaagactctggagtgtgtgttgtgtttccggtacagtggc
ggtccggggcatgtggacggttactacagagagctcagtctgggcatcagagtggacgtg
gagccctctgtgttcttcaccagggtcaacacgctaccggctaccagtacacgtcagtgc
cacttgctgctggatgtgtttaaccctactgagcatgaactcacactcaccgccaggaac
caggaactggtgctacactccaacgagtgtcagaggatggccattcaggtggataagttt
gactttgagagcctgccgatgccatcccatgatgctgtgcatcagagcagtgtgtatgag
cgggaggaggagaagcagcagcaggttcagggaggacacatcaacaacacgctacagctg
cgctggaccatcccgtctctgaagaggcagggcgaagcaagcgtggagggtgtcctcacc
cagctcgtcctggagcacctacagctcacgccgctacagtgggacatagcggtgaatggt
aaagcgtgcgactgtgacgtggttgccgagtgtaaggtgggcgacgccgtgccgttggaa
gtcaagctaaccaatcgcagcaagagcgccgtgggaccgttctctctcacggtggtgccg
tttcaggactatcagaacggcgtgcagaactatgagctgcaggaagccgtcacgttcatc
ggctccaactccttctacatcgaatcggtgagtccagcggggaactcagtctgtgctggc
gcattgctgttcctttacaccggggatttctacctgaacattaagttccaggatgacagc
acaagccgagaccttcctccgacgtggttctgcttgcccagcgtccacatccgagcacaa
gaaccaatcgatgcagctgcctga
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