Ictalurus punctatus (channel catfish): 108275118
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Entry
108275118 CDS
T04658
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03320
PPAR signaling pathway
ipu04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108275118 (pparab)
03320 PPAR signaling pathway
108275118 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108275118 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108275118 (pparab)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108275118 (pparab)
Nuclear receptors [BR:
ipu03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
108275118 (pparab)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108275118
NCBI-ProteinID:
XP_017341209
Ensembl:
ENSIPUG00000011666
UniProt:
A0A2D0SER3
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Position
14:21018866..21049305
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AA seq
466 aa
AA seq
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MVDIESPYSPLSPLEDSVLNSPLYTDFVVAGNLQDISEPINEEALSNLDVSEYHSSGLCS
SSESSTVPDALTPASSPSSVVCGVVAGQEEFTSASLNLECRVCADRASGYHYGVHACEGC
KGFFRRTIRLKLDYDKCERHCKIQKKNRNKCQYCRFQKCLAVGMSHNAIRFGRMPQSEKL
KLKAEILTGEREVENPQLADQKTLAKQIYEAYLKNFSMNKSKARTILTGKTNTPPFVIHD
METLHLAEQTLVAKMVGTAGGLLDKDAEVRIFHCCQYTSVETVTELTEFAKSVPGFCNLD
LNDQVTLLKYGVYEALFAMLASCMNKDGLLVAYGSGFITREFLKSLRRPISDMMEPKFQF
AMKFNALGLDDSDLALFVAAIICCGDRPGLMNVPYIERMQESIVHVLQLHIQNNHPDNSF
LFPKLLQKLADLRQLVTEHAQLVQEIKKMEDTSLHPLLQEIYKDMY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggtagacatagagagcccctacagccctctgtccccgctggaggactctgtgctgaac
agcccgctctacacggacttcgtggttgcgggaaacctccaagacatctcagagcccatc
aatgaagaggcactcagcaacctagatgtatccgagtaccactcatccggcctgtgctcc
agctccgagagctccacggtgccagatgctctaactccagcctcgagtccgtcttcagtt
gtgtgcggggtcgtagcaggacaggaagagttcacctctgcttctctaaacctggagtgt
cgtgtgtgtgcggaccgagcctcaggatatcattatggtgtccatgcttgtgagggttgc
aagggcttcttcaggcgcacgatccgcctcaagctagattatgacaagtgtgaacgccac
tgcaaaatccaaaagaagaaccggaacaagtgccaatactgccgctttcaaaagtgccta
gctgtgggcatgtcccacaatgccatccgctttggccgaatgccccagtccgagaagctg
aagctgaaggcagagatactaactggggagagggaggtggagaatcctcagttagctgac
cagaaaaccctggccaaacagatctacgaggcttatctgaagaacttcagcatgaacaaa
tctaaagcgcggaccatcctgacaggcaaaacaaacacaccaccctttgtaatccatgac
atggagactttgcatctagctgagcagactctggtggcaaagatggttggcactgcaggt
ggactgcttgataaggatgcagaagtgcggatcttccactgctgccagtacacgtcggtg
gagactgtcacagagctcactgagtttgccaagtctgttccaggcttctgcaacctcgac
ctgaatgaccaggtaacactgttaaaatatggtgtgtatgaggcactctttgccatgctg
gcctcttgcatgaataaagatggattgctggttgcctatggcagtggcttcatcacacga
gagttcctaaagagcctgcgacgacctattagtgacatgatggagcccaagttccagttt
gccatgaagttcaatgcactgggactggatgacagtgacctggccctgtttgtggcagcc
atcatctgctgtggagatcgcccaggcctgatgaatgtcccatacatcgagcggatgcag
gagagcatcgtccacgtcctgcagctccacatacagaataaccacccagacaattctttc
ctcttccctaaactcctgcagaaactagctgacctgcgtcagctagtcacagagcatgcc
cagttagtgcaagagatcaagaaaatggaggacacatcactgcatcctctgctccaggaa
atctacaaagacatgtactaa
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