Ictalurus punctatus (channel catfish): 108275131
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Entry
108275131 CDS
T04658
Name
(RefSeq) tumor susceptibility gene 101 protein isoform X1
KO
K12183
ESCRT-I complex subunit TSG101
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03250
Viral life cycle - HIV-1
ipu03272
Virion - Hepatitis viruses
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108275131
03272 Virion - Hepatitis viruses
108275131
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108275131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108275131
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108275131
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
108275131
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
108275131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
HAUS1
DUF3450
UQ_con
ANG-1
FapA
Exonuc_VII_L
CC_Bre1
SlyX
TPR_IF140_C
Xpo1
HARE-HTH
Phage_scaffold
Prominin
DUF5685
DUF6468
EMP24_GP25L
Spc7
DUF724
Gp-FAR-1
GPS2_interact
V_ATPase_I
APG6_N
Motif
Other DBs
NCBI-GeneID:
108275131
NCBI-ProteinID:
XP_017341227
Ensembl:
ENSIPUG00000005937
UniProt:
W5U6K6
LinkDB
All DBs
Position
14:10846750..10859578
Genome browser
AA seq
390 aa
AA seq
DB search
MAVVNEGALKKMLKQYKYRDLTVREITNVILQYKDLKPLMDAYVFNDGSTRELMSLTGTV
PVSYRGNVYNIPVCLWLLDTYPYNPPICFVKPTSAMMIKTGKHIDANGKIYLPYLHEWKH
PQSDLYGLIQVMIVVFGEEPPVFSRPTTQPSYQAFQAAGPPNQAYMSGMPAVSAYGPNPN
PCGYPGYSYPGGSAYPATGGPAHYQSQPQVTTVGPSRDATIGEDTIRASLISAVSDKLRW
RMKEEMDRAQAELDALKRTEEDLKKGHQKLEEMVSRLDQEVTEVDRNIELLKKKDEELTE
ALEKMENQSENNDIDDVIVPTAPLYKQILNLYAEENAIEDTIFYLGEALRRGVIDLEVFL
KHVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgtaaacgaaggagcgcttaaaaagatgcttaagcaatacaaatatcgtgac
ctgacagttcgtgagatcacaaatgttatcctgcaatacaaagaccttaaaccgctgatg
gatgcttatgttttcaatgatggatcaacaagggagctaatgagtttaactgggacagtg
ccagtgagctacagaggaaacgtatacaatattcctgtgtgtctatggctgttggacaca
tacccctacaacccgcccatttgtttcgtaaaaccaacgagtgcgatgatgatcaagacc
gggaaacacatcgatgcaaacggcaagatctacctgccatatcttcacgaatggaagcat
cctcagtctgacctatacggcctgatccaagtgatgattgttgtttttggagaagagcct
ccagtgttctctcggcctacgactcagccctcctaccaggctttccaggccgcaggacct
ccaaatcaggcatatatgtctggtatgcctgctgtatcagcctatgggccaaaccctaat
ccatgtggctacccaggatattcttaccctggagggagcgcgtatcctgccacggggggt
cctgctcactaccagtcccagccgcaagtcaccactgtgggtccgagtcgagacgccacc
attggggaggacactatccgtgcctctctcatctcggcagtgagtgataaactgcgctgg
aggatgaaggaagagatggatcgggctcaggcagagctggacgcacttaagcgcaccgaa
gaggatctgaagaagggccatcagaagctggaggagatggtgtccaggcttgaccaggaa
gtgactgaggtggacaggaatattgagctcttaaagaagaaagatgaagaactgacagag
gctctggagaaaatggagaatcagtcagagaacaatgatattgatgatgtcattgttccc
acagcgccactctacaagcagatcctgaacctgtatgcagaggagaacgccatcgaagac
accatcttctacctcggagaggctctgcgccgaggcgtcattgatctggaggtctttctc
aagcatgtccgcctgctctcccggaaacagttccagctgcgagcgcttatgcagaaggct
cggaagactgctggactcagtgacctctactga
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