Ictalurus punctatus (channel catfish): 108275148
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Entry
108275148 CDS
T04658
Name
(RefSeq) DNA polymerase subunit gamma-1
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108275148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
108275148
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108275148
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108275148
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
108275148
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
108275148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
Motif
Other DBs
NCBI-GeneID:
108275148
NCBI-ProteinID:
XP_017341251
Ensembl:
ENSIPUG00000004036
UniProt:
A0A2D0SFK8
LinkDB
All DBs
Position
14:complement(12695841..12708823)
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AA seq
1194 aa
AA seq
DB search
MLRLVSPRRSWRCPSAALQRRKCSASAEPKVQERSTQTRVNPLNIQMLSRNLHEQIFRSS
TVEYSSEDIERSIRHLEKHKLWGKEASLLSDVELKLPNMYGKNIDEHFCKLAQKQSLPYL
EAAGQLQQAQLPDMPPQWAWEVGWVRYLQNGEHIKVDFPEENALVFDVEVCMAEGHCPTL
AVAVSPNAWYSWCSKRLIEERYSWSSQLTLADLIPLETAANSSRPPGGHWQERLVVGHNV
SFDRAHIKEQYLLKGSKMRFLDTMSLHMAISGLTGFQRSLWMASRYGKRQGLHEVKQHMK
KLRRRPEGPVIGSWDWVNISSINNLADVHALYVGGDPLEKEARNIFVKGSMSDIRSNFQE
LMQYCAMDVLATHEVFIQQLSLFLERCPHPVTFAGMLEMGVCYLPVNQSWDRYLEDAQDT
YDELQREMKKSLMILADDACQLLQDDRYKEDPWLWDLEWDVQEFKQKKMTVSKKKKAKQE
AEKAAAASSSGNLEKDWDEDPGPPEEEEGMKDPSRELLERLKGTVSCLPKRRQHMPAHPG
WYRKLCLRMSEEEDWSPGAILISLQMRVTPKLMGLTWDGFPLHYTEKHGWGYLVPGRRDN
LETTEDTEGPICPYRAIENVYKEYCEQKGKEQPQCLDSLPSDDLMLTDSSVWQTVEELSR
LEVVSEDEILPRTVRAKKATSIDSANECPYHHGNGPYNDVNIPGCWFFKLPHKDGNENNV
GSPFSKDFLSKMEDGTLQAGRGGTNAARALEINKMISFWRNAHKRISSQMVVWLRRGELP
RTVMRHDDYNEEGQYGAILPQVVTAGTVTRRAVEPTWLTASNARRDRVGSELKAMVQVPP
GYHLVGSDVDSQELWIAAVLGESHFAGMHGCTAFGWMTLQGKKSQGTDLHSCTADAVGIS
REHAKVFNYGRIYGAGQPFAERLLMQFNHRLSQNEAASKARQMYALTKGLRRYHPSEEGE
WLIKELGVDVKRDEDGTVSREELGRISKLLHQRSRNKRKWDIFGRRVWSGGTESEMFNKL
ESIAHSKQPATPVLGCRISRALEPAAVKEEFITSRVNWVVQSSAVDYLHLMLVAMKWLME
EYDIDGRFCISIHDEVRYLVKSEDRFRAALALQIANLLTRCMFAYKLGMNDLPQSVAFFS
AVDIDQCLRKEVVMDCVTPSNPTGLERRFGLAQGEALDIYQIIEITKGSLAKGR
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgctccgtctggtgtctcctcgaaggagttggcgatgcccttcagctgctctgcagagg
cgaaagtgctcagcttcagctgaacccaaagtgcaggagcgctccactcagacccgtgtg
aatcctctcaacatccagatgctctccaggaacctgcacgaacagatttttcgctcctca
actgtagagtactcaagtgaggacatagagcgaagcatccgacatttggagaagcataaa
ctctggggaaaggaggcatcactgttgagtgatgtggaactaaagttaccaaatatgtat
ggcaaaaacattgatgagcatttttgtaaacttgcacaaaagcaaagcctgccttatttg
gaagcagctgggcagctccagcaagcacagctgcctgacatgcccccgcagtgggcttgg
gaagtaggctgggtaaggtatttgcagaacggagaacatataaaggtggattttccagag
gaaaatgctctggtgtttgatgtggaagtctgcatggctgagggccactgtcccacactg
gcagtggctgtttctccaaatgcttggtactcatggtgcagtaaaagacttattgaagag
aggtacagctggtccagtcagctgacgctagcagacctaattcctttggagactgcagcc
aactccagcaggcctcctggtggacactggcaagagagacttgtagtgggacacaatgtt
agctttgaccgagcgcacattaaagagcagtacctcttgaagggctccaagatgcgtttc
ctggatacgatgagcctccacatggctatctcaggactgacaggttttcagcgatccctc
tggatggccagcaggtatggcaagagacaaggactgcatgaagtcaagcagcacatgaag
aagcttcgacgccgccctgagggcccagtgattggttcttgggactgggtcaacataagc
agtataaataacctagctgatgtccatgctctctatgttggaggtgatcctctggaaaaa
gaggccaggaatatttttgtgaagggcagcatgagtgacattaggagcaatttccaggag
ctgatgcagtattgtgctatggatgtactggctactcatgaggtgtttatccaacaattg
tcccttttcctggaaaggtgtcctcatccagtgacctttgctggaatgttggagatgggt
gtttgctacttgcctgtcaatcagagctgggaccggtatttggaggatgcccaggacaca
tatgacgagcttcaaagagagatgaaaaaatctctgatgattcttgcagatgatgcctgt
cagttattgcaggatgacaggtacaaggaggacccttggctttgggacttagagtgggat
gttcaggagtttaaacagaagaaaatgactgtgagcaagaaaaagaaggcaaagcaggag
gctgaaaaagcagcagcggcatcttcatctggcaacctggagaaagactgggatgaggat
ccaggacctccagaggaagaggaagggatgaaggaccccagcagagagcttctggagcgg
ctaaagggtacagtgagttgcctgccgaagaggagacagcacatgcctgcacacccaggc
tggtaccggaagctgtgtttgaggatgtccgaggaggaggactggtctcctggagccatt
ctgatcagcctgcagatgagagtgacacccaagctgatgggcctgacatgggatggtttt
cctctgcattacacagaaaaacatggctggggctaccttgtcccaggacgcagagacaac
ttggagaccacagaggacactgaaggacctatatgtccctacagggcaattgagaacgtc
tacaaagaatattgtgaacagaaagggaaggaacagccacagtgtctggacagtctgccc
tcagatgaccttatgctaactgacagcagtgtgtggcaaacagtggaggagttgagtcgg
cttgaggtcgtgtctgaagatgagatattgccacggacagtgagagccaaaaaggctacg
agtatagactcggctaatgagtgtccctatcaccatggtaatggaccatacaatgatgtc
aacatccctggatgttggttcttcaagctacctcataaggatgggaatgagaataatgtg
ggcagccccttctctaaagattttctctctaaaatggaggatggaacccttcaggcaggc
agaggaggaaccaatgcagcgcgtgcactggagatcaacaaaatgatctcattttggaga
aacgcccacaaacgcatcagttctcagatggtcgtctggctaaggaggggagaacttcct
cgcactgttatgagacacgatgactacaatgaggaggggcaatatggtgccattttaccg
caggttgttactgctgggacagttacacgcagagctgtagagccaacatggcttaccgcc
agtaatgcacggcgggatcgtgtaggcagcgaactgaaagctatggtgcaggtgccccct
ggttatcacctggtggggtcagacgttgactcgcaggaattgtggattgcagctgtgcta
ggagagtctcactttgctggcatgcatggttgcacagcgtttgggtggatgaccttgcag
gggaagaagagtcagggcacggacctgcacagctgcactgcagatgctgtgggcatcagc
cgggagcatgctaaagtcttcaactatggtcgcatctacggtgctggccagccatttgca
gagcgcctactcatgcagttcaaccatcgattaagccaaaatgaggcagcaagcaaagca
cgccagatgtatgctctcactaaaggactacgcaggtatcatccctcagaggagggggaa
tggttaattaaggaactaggtgtggatgtgaagagggatgaagatgggactgtgtccaga
gaggagttaggccggatttcaaaactattgcaccagagatctcggaataagaggaagtgg
gatatatttggacggcgtgtgtggagtggaggtactgaatctgagatgttcaacaagctg
gagagcatcgctcactcaaagcagccagccactcctgtgctaggctgcagaatttcccga
gccctggagccagctgctgtcaaagaagagttcattaccagcagggtgaactgggtggtg
cagagttcagcagtcgactaccttcacctgatgctggtggccatgaagtggttgatggag
gagtatgacatagatgggcgcttctgtatcagcattcatgatgaagtgcgctacctagta
aagagcgaggaccgcttcagagcagcactcgcactacagatcgccaacctacttacccga
tgtatgtttgcctataagctgggcatgaatgatctccctcagtctgtggctttcttcagc
gctgtagatattgaccagtgcttacggaaagaggtcgttatggactgtgtaactccatct
aatcctactggactggagcgccgatttggactagcacaaggtgaagccttggatatctat
cagatcattgagattactaaagggtctttggccaaaggaagatag
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