Ictalurus punctatus (channel catfish): 108275149
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Entry
108275149 CDS
T04658
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108275149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108275149
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
108275149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
108275149
NCBI-ProteinID:
XP_053541972
Ensembl:
ENSIPUG00000004103
UniProt:
A0A9F7RKJ2
LinkDB
All DBs
Position
14:12681156..12696740
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AA seq
1334 aa
AA seq
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MKAAIDKILSLSEGDKSIKELQHHLTSLSHDQLTALITNAALKGKDTAALIKAIFRGSPV
SSSDGASRRLCVYKHCIPLCESGDLQTECASDIIGLLMLETHGLPGPALAALASLYVDAI
KGGEMGSGKSLELFPTILTALAATETLAYAKGELSGEEYKKQLINSLCSSRWDPQCVIHL
TTMFRDVPLSPEELQFLIEKILRMFLKLDLQEIPPLIYQLLLLSAKGCKKLLLEGIINYF
REQDRCQKEEQSKGESKDVEVQTIPQDQLRHVEGTAILHIVFAIRLDHELGREFLKSLKV
SQGQPLCPFSIALLLSVARIQRYEEQVFEFLKGAITKNFKDEQAQQGSKFLQDLLPSCHS
ISNMIMDTVRNSLFGWDHVTQSLVQLGFILMDLFGPKAGPFGKTTEIPTATAKTPSQLAC
KLGGQVLLESFKMHEPIRVEILEQVLNRLVTKTASPVTHFIDLLSNIVISAPMILLESSS
KVLETFDQLSFLPLTTVQGLLKAVQPLLKVSMSLKDALILVLRKAMFSSQLDGRKSAVAG
FLLLLKNFRVLGSLASSQSSQALTSSQVQADVHSRYNTAANEAFCLEILSSLRRCLSQQA
DVRLMLYEGFHDVLRRNSQLAGSIMQTLLSQLRRYYEPEQDLLPPVKLESCINAQGDQVF
LQEPLAHLLSCTIHCLLWYQSVRDPSEGESDDEEEDEEGFQDELHAILESVTRRMIKCEL
EDFELDKSAEFSMASSVGVKNSVYAVLVMGVYEVLIEYNYITGNYSSKSGFQDVLELFNR
YYKLAEILREKSGKGRTPSNKTPRSLLSLGFVSTLLTALFRDSTQSHEESLSVLRSSGEF
LRYSVSVALQKVQQLEETGYTDGPDGQNSDKTFRHLCEITSVLMWRYTNIPSSVEDAGKK
SHSVSLLCLEGLLRIFSTMLQQYPTKVSNFLCSLDVCRQEEEGAPENANLTEKTAFYIRQ
FQRALFSQLSGGEEDFSSREAQLLVSILSVLSRLLEPTSQQFLQMFTWTVKICKETSFED
ISFSKGLLSLLFSLHVLYKSPVSLLWELCQDIHSQLGDIDKDVEVEKQSHFAIVSMKTAA
STTLLVMSQVGRVLDEVDWLITKKKGQLTSDRTTTGGPSQSSAQQDPVEKAVTLQLGTLL
TALNELVQTALPPGACTDALLRELSRTYGILTTLIKYYIQLCVAHPGQLPARLEKLVKLS
GSHLTPQCYLFITYVQSGEMNGGVNERKKKRKEEEAVVAASAKVLRDTKPIPTLIFNIEQ
YEKFLIVLSKKSKVNLMQYMKLSTSRDFRINTATLEAALQEQQHESQQVCLLMLSYISKS
LGLLFSRYMESNVR
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgcaattgacaagattttgtccttatcggagggagataaatctataaaggag
ctccagcatcacctcacttctctgtctcatgatcagttgactgcactgatcacaaatgct
gccctgaaaggaaaggatacagcagccttgatcaaagctatattcagaggctcacctgtg
agtagttcagatggggccagtcgcaggttgtgtgtgtataagcactgtattcctctctgt
gaatcgggagacctacagacagagtgtgcttcagatattatcgggttgctaatgttagag
acacatggtctacctggccctgcgttggcagcgttagcgtctttatatgtggatgcaata
aaagggggtgaaatgggtagtgggaaatcactggagctcttccctaccatcctcactgcc
ctggcagctacagagactttagcttatgccaaaggagagttaagtggagaggaatacaag
aagcaactgatcaatagcctttgttcaagccggtgggacccgcagtgtgtgatccacctt
accaccatgttcagggatgtgcccttatctccagaggagctgcagtttctgattgaaaag
attctgcggatgttccttaagttggacctgcaagagattcctcctctaatttaccaactg
ctgcttctgtctgccaagggctgtaaaaagctcctgctggaaggaattattaactacttt
cgagagcaggaccgttgccagaaagaggagcagagcaaaggagagagtaaggatgttgag
gtgcaaaccatcccacaggaccagctgagacatgtggaaggaactgctattttgcacatt
gtatttgccattcgccttgaccatgagcttggcagggagtttttaaaaagcctcaaggta
tctcagggtcagccactgtgtccattcagtatcgctctgctgctgtctgtggctcgcatt
cagcgctacgaagagcaagtatttgagttcttgaaaggtgcaatcactaagaatttcaag
gatgagcaagctcaacaaggttctaagtttctgcaggatctgctaccctcctgccacagt
atctcaaacatgattatggacacggtcagaaacagtctgtttgggtgggatcatgtcaca
cagagcctggtgcagttaggctttatccttatggacttgtttggaccaaaggcaggacct
tttgggaagaccactgaaattcccactgctacagctaaaacaccttcccaactagcatgt
aaacttggtgggcaagtacttctagagagcttcaagatgcatgagccaatcagggtagaa
atcctggagcaagtcctgaatcgattggttactaagacagcttctccggttacgcatttt
attgacctgctttctaacattgtgatatccgctcccatgatcctcctggagtcctcctca
aaagtgttagagacctttgaccagttatctttcctgcctcttaccacagtgcagggtcta
ctcaaagcagtgcagccactgctcaaggtcagtatgagcttaaaggatgccctaattttg
gtgctgaggaaagccatgttctccagtcagttggatggacggaagtctgctgtggctggc
tttctcttgctgctgaagaacttccgggtcttggggagtctggcctccagtcagtccagc
caggcactgacctccagccaggtccaggcagatgtccactcgcgctataacaccgctgct
aatgaggctttctgtctggagatcctgagcagccttcgccgctgtctcagccagcaggca
gatgtgcgcctcatgctgtatgagggtttccatgatgttctccgacgcaactctcagttg
gcagggtccatcatgcagacacttctgtcacagctgaggcggtactatgagcctgaacag
gatcttttgccacctgtgaagttggagtcatgcataaatgcacagggagatcaggtcttc
ctccaggaacctctggctcatttgctctcctgtacaatccactgcctgctgtggtatcag
agtgtgcgagatccctccgaaggtgagagtgatgatgaagaggaagatgaagaagggttc
caggatgaactccatgcaattctggagagtgtaactagacgcatgatcaagtgtgagctg
gaggactttgagctggataagtctgcagagttctccatggcatccagtgttggggtgaag
aacagtgtctatgccgtgctggtgatgggagtttatgaggttctcatagaatacaactac
atcacaggcaactacagcagcaaaagcggttttcaggatgtcctggagctttttaatcgt
tactacaaactggctgagatcctgagggagaagtcaggaaagggccggacaccctctaat
aaaactccccgcagtctgctctctctgggatttgtatccaccctactgactgctctcttc
cgagacagtactcagagtcacgaggagagcttgtcagtgctgcgctccagtggagagttt
cttcgctacagtgtgagcgtagccctgcagaaggttcaacagctggaggagacaggctac
acagatggacctgatggccagaactctgacaagactttccgtcatctctgtgaaatcact
agtgtgctgatgtggcgatacaccaacatcccatcatcggtggaggatgctgggaagaag
agtcacagtgtgtctctgctgtgtttggaggggttactgcgcatctttagcaccatgtta
cagcaatacccaaccaaagtgtccaacttcctgtgttctcttgatgtttgcagacaggag
gaggagggtgcacctgaaaatgccaacttgacagaaaagactgccttctacattcggcaa
tttcagcgtgccctgttcagccagctgagtggaggagaggaggacttcagcagcagagaa
gcccagctgctagtcagcatcctcagtgtgctgtcccgcctgctggagcccacctcccaa
cagtttctccagatgtttacctggacagtaaaaatttgtaaagaaaccagctttgaggac
atatctttcagtaagggtctgctgtctctgctcttcagtctgcatgtcctctacaaaagt
cctgtatctctgctgtgggagctctgtcaggacattcacagtcagctaggggacatagac
aaggatgtggaggtggagaagcagtctcactttgccattgtaagcatgaagactgcagca
tccaccacacttttagtaatgtctcaggtggggagggtattggatgaggtggactggttg
attactaagaaaaaaggccagctaacatctgatagaacaaccacaggaggtccctcacag
tcgtcagcccagcaggaccctgtggaaaaagcagtgactctgcagttgggcacactgctt
acagctctgaatgagcttgtgcaaacagctctgcctcctggtgcctgcacagacgccctg
ctgcgagagctcagccgaacctacggcattctcaccaccctcatcaaatactatatccag
ttgtgtgtagctcatccaggtcaacttcctgctcgtctggagaaattggtgaagctgtca
ggctctcacctcacccctcagtgctatttgttcatcacatatgtgcagagtggtgagatg
aatggaggagtaaatgaaaggaagaagaaaagaaaagaagaggaagcagttgtggctgcc
tctgctaaggttcttcgtgataccaaaccaatacccactctgatcttcaatattgaacaa
tatgagaagtttctaattgtcctctccaagaagtcaaaggtaaatctgatgcagtatatg
aagctgagcacttctcgagactttcggatcaatactgccacactggaggctgcactacaa
gagcagcagcatgagagccagcaggtttgtttgcttatgctcagttacatttccaaatct
ttaggcttattatttagtaggtacatggaaagcaatgttagatga
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integrated database retrieval system
