Ictalurus punctatus (channel catfish): 108275182
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Entry
108275182 CDS
T04658
Symbol
hars
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108275182 (hars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ipu01007
]
108275182 (hars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108275182 (hars)
Enzymes [BR:
ipu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
108275182 (hars)
Amino acid related enzymes [BR:
ipu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108275182 (hars)
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108275182 (hars)
Prokaryotic type
108275182 (hars)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
108275182
NCBI-ProteinID:
XP_017341300
Ensembl:
ENSIPUG00000010757
UniProt:
A0A2D0SGB2
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Position
14:complement(6141741..6154864)
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AA seq
523 aa
AA seq
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MATLGLSCVRLCTGLTLRRASPWLRPLRCLSGMTVSQIDEEVSKLLELKARLGGDDGKHT
FVLKTAKGTRDYNPKQMAIREKVFNIIISCFKRHGAETIDTPVFELKETLTGKYGEDSKL
IYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQ
CDFDIAGQYDPMIPDAECLKIVYEILSELDLGDFHIKVNDRRILDGMFAVCGVSDEKFRT
ICSTVDKLDKMPWEDVKNEMVNEKGLSEDVADQIGEYVSMQGGLDLAERLLQDPKLSQNK
QACAGLTDMKQLFGYLQLFQVTDKVVFDLSLARGLDYYTGVIYEAVLCQTLQTPAAAEQN
GAVPGDEAGVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEMSAE
KIRTTETQVLVASAQKNLLEERLKLTAELWNAGIKAEVLYKKNPKLLTQLQHCEETGIPL
VAILGEQELKDGVVKLRNVANREEVDVSRAELVEEIKKRTSQS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggccactctcggcttgtcatgtgtgcgtctctgtactggactgacactccgccgggct
tcgccgtggctccgccccctgcgctgcctttctggaatgactgtatctcagattgatgaa
gaagtttccaaactgttagagctgaaggctcggctcggaggagacgatggcaaacacacg
tttgttcttaaaacagcgaaggggaccagggactacaaccccaaacagatggccatcaga
gagaaggtcttcaacatcatcatcagctgctttaaacgccatggtgctgagaccatcgac
acccctgtctttgagctcaaggaaacgttgacggggaaatatggtgaagactccaaactc
atctacgacctgaaggaccagggaggagagctgctgtctctcagatacgacctcactgta
ccttttgctcgctacttggccatgaacaagatcactaacatcaaacgctatcacatcgcc
aaagtgtaccgcagagacaaccctgccatgacccggggccgctaccgagagttctaccag
tgtgatttcgacatcgccggacagtacgacccgatgatccctgacgcagagtgtttgaaa
attgtttacgagatcctgagtgagctggacctgggcgacttccacattaaggtgaatgac
cggcgcattctggacggtatgtttgcggtgtgcggcgtttcagatgagaaattccgcacc
atctgctcgactgtggacaaattagataagatgccatgggaggatgtgaagaatgagatg
gtgaatgaaaaaggcctgtctgaggatgtggctgatcagattggggagtacgtcagcatg
cagggtggactggatctggcagagaggctgctgcaggacccaaagctttctcagaacaag
caggcgtgtgccggcctgaccgacatgaagcagctgtttggttacctgcagctcttccag
gtcacagataaggtggtgtttgatctgagtctggcacgtggcttggactactacaccggt
gtgatctacgaggccgtgctgtgtcagacgctccagacgccggcggctgcagagcagaac
ggagccgtgcctggggacgaggccggggtgagcgtgggcagcgtggcgggaggagggcgc
tacgacggactggttggcatgttcgaccccaaggggagaaaagtcccctgtgtaggcgtc
agcatcggcatcgagaggatcttctctataatggagcagaaagcggagatgtctgcagag
aaaatccgcaccacagaaacgcaggttctggtggcctcagcacagaagaaccttctggaa
gagcgactcaaactcaccgccgagctctggaacgccggaattaaggccgaggtgctgtat
aagaagaaccccaagctgctgactcagctgcagcactgtgaggagacgggcatccccctg
gtggccattttgggggaacaggagctcaaagacggtgtcgtcaaactgcgcaacgtggcc
aaccgagaagaggtggatgtatccagggcagaactggtggaagaaatcaagaagcggaca
tcacagtcctaa
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