Ictalurus punctatus (channel catfish): 108275227
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Entry
108275227 CDS
T04658
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108275227 (gabra6a)
04082 Neuroactive ligand signaling
108275227 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108275227 (gabra6a)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108275227 (gabra6a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108275227
NCBI-ProteinID:
XP_017341372
Ensembl:
ENSIPUG00000011213
UniProt:
A0A2D0SF70
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All DBs
Position
14:5161348..5167365
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AA seq
287 aa
AA seq
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MDMFFRQMWVDKRLAFNGPIEILRLNNRMVDKIWTPDTYFHNSKKSLAHNMTTPNKMFRI
MQNGTVFYTMRLTVSAECPMMLMDFPMDSHICPLSFGSYAYTSSEIVYTWRKGLEKSVVI
PPESSNLLQYDLIGQTLFNKMSLINTGQYSVKMVHFFLQRKLGYHLIQTYIPLIMVVVLS
QVSFWINKESVPARTVAGVTTVLTMTTLSISARSSLPKVAYATAMDWFIAVCFAFVASAL
VEFAAVNYFATLEANKMRRRLSRASVLEYIAEGSDDEDESVNTAAQY
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtttttccgtcaaatgtgggtggacaagaggctggcgttcaacggtcccatc
gagatcctgcgcttaaacaaccgcatggtggacaagatttggactccagacacttatttc
cacaactcgaagaaatcactggctcacaacatgacaacgcccaacaagatgttccgcatc
atgcagaacggcactgtgttctacaccatgaggctgactgtgagtgcagagtgtcccatg
atgctgatggactttcccatggatagtcatatttgtcctctcagcttcggaagctatgct
tacaccagcagtgagattgtttacacgtggaggaaaggattagagaagtctgtggtcatc
cctccagagtcctccaacttactgcagtatgacctcatcggacagacgctcttcaacaaa
atgtcgttgatcaatacaggccaatattctgtcaagatggttcatttcttcctccagagg
aagctcggctatcatctgatccaaacgtatatccccctcatcatggtggttgtcctgtcc
caagtgtccttctggatcaacaaggagtccgtccctgctcgcaccgtggctggagtcacc
accgtcctcaccatgaccacactgagcatcagcgcacgatcttcactgcccaaagtggcc
tatgccacagctatggactggttcattgctgtctgcttcgccttcgtggcctcggccctg
gttgagtttgccgccgtcaactacttcgccacgctggaagccaacaagatgagacgtcga
ctctcaagagcttctgtgctggagtacatcgcagaggggagcgacgatgaagacgagtcg
gtaaacactgcagcccaatactaa
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