Ictalurus punctatus (channel catfish): 108275242
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Entry
108275242 CDS
T04658
Name
(RefSeq) AP-4 complex subunit epsilon-1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108275242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108275242
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Others
AP-4 complex
108275242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Cnd1
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
108275242
NCBI-ProteinID:
XP_017341401
Ensembl:
ENSIPUG00000009353
UniProt:
A0A2D0SFZ9
LinkDB
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Position
14:22137779..22155629
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AA seq
1138 aa
AA seq
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MSDVVEKTLSALPGLLSLDSQPGASKLSPTSKLGHLVRNITELTSKNEEEKLITKELAAI
KDQISSPSTTMRQMRELMVRAMYCEMLGYEASFAYIHAIKLAQQGTVLEKRVGYLAVSLF
LNESHELLLLLVNTVLKDLQSTNLIEVCMALTVVSQIFPKDMIPSILPLVEEKLSHQKEI
IRRKAVLALYKFYLIAPNQVQHIHSKFRKALCDKDPGVMMSSLHIYLRMIKENPDNYKEL
TSSFVTILRQVIGGKLPMDFNYHSVPAPWLQIQLLRIVSLLGKEDQSTSELMYEVLDESL
RRAETNHNITYAILYECVKAIYTVYPKAELLEKAARCIGNFVLSPKINLKYLGLKALTYV
VQYDANLALQHQMTIIECLDHSDLIIKRETLELLFRITNAQNVTVIVEKMLGFLRLCNDN
YTIVDLVGKVAELAEKYAPDNEWFIQTMNAVFSLGGDLMQPDIPNNFLRLLEEGSDVEEE
DRQLRLYAVDSYMAVLKGDCSHLPQCFLQVISWVLGEYSCVREGLDQREVVVLLKKLLEQ
RGVSSETRSWVLCALTKLCTSSGSAELVLELAESSASSLDTVLRQQAYELLCLSRDSQLH
ARVLHQSRASTQVDSSLSFLDGFVSEALAAGAAPYKPPHQRQEELCQQRALSLEPYGLSL
PVGMSSCTLTDRQSPTLLSVSSGLSGNSTEPSLRTEASTLVLDGVKRVWGKEGYLSQKES
SETSAVVDELKSVLQSCNQEVATHAPQPQLEPPHVDQEKQQLASSLFVGLGSQNSISLLE
KTEAPAPRFRRKHRHHESAASSSSSSSTRETSTDSSQSSRRRTDALYDSLLEEEPVTHPQ
DSNHTSTLMSTTVNGSCDTTRPSQTTNGLGENEADTADRLLIRPDAPADQASVAPQNGCP
DTTVLHLPSELEDLPRSDVISLTSDPHLSVSCCRVYREDALLLVLFACNTTETPLRDVAV
ELSCEELEMASLRGNVMERLDGRDSSVCRYTLLMERPHIQVTFRGAVLYQTQSGHSHTLL
FSGHLSTADFIRPLMLSTEEYGKLWLSFSNDVKQNLKLLTGARGPLITTLDALQESLRLH
TVHIIGSEGIVACRLLSGAPCLMHCRVHGSSLAVWLRSPLNAFPDCLLYHCQRVLQEP
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgttgttgagaagaccctcagtgctctcccgggtctgctgtcgctggattct
cagcctggagcctccaaactttcacccacctccaaattaggacacctggtcagaaacatc
actgagctgacatccaaaaatgaagaagagaagctcatcactaaagagctggctgctatt
aaagatcagatttcatcaccttctactacaatgagacaaatgagggagctgatggtgaga
gccatgtattgcgagatgctcggatatgaagcctcttttgcttacatccatgccatcaaa
ctggctcagcaaggcacagtactggagaagagagttggttacctggcagtgtcactgttt
cttaacgagagtcatgaactgctgttactgctggtcaatactgttttaaaggatcttcaa
agcaccaacctcattgaggtctgcatggctctgactgttgtaagtcagatatttcccaaa
gacatgatcccgtccattctgcccctggtagaagagaagctgtctcatcaaaaggaaatc
attcgacggaaagccgtacttgctttgtacaagttctacctgatcgctccgaaccaagtg
cagcatattcacagcaagtttcggaaagccttgtgtgacaaagatcctggagtcatgatg
tcctcgttacacatctacctacggatgattaaggagaacccggacaattacaaggagctg
acgagcagctttgtaaccatcttgaggcaggtgattggagggaagctgccaatggacttt
aattaccacagtgtccccgctccgtggctgcagatccagctgctccgcatcgtgtctctg
ctggggaaagaggaccagagcacgagcgagctgatgtacgaggtcttggatgagtctctg
cgccgagcggaaacgaaccacaacattacttatgcaattctgtatgagtgtgttaaggcg
atctataccgtataccctaaagccgagctgctggaaaaagcagcgagatgcatcggaaac
tttgtgctgtctccgaagatcaacctgaagtacctggggttgaaagctttaacatacgtg
gttcagtatgatgccaacctcgctctgcagcaccagatgactattatcgaatgtttggat
cactcagacctcatcatcaagagagagactttagagctgctcttcaggatcacgaacgct
cagaacgtcaccgtgatcgtggagaaaatgttgggattcctccggctttgtaacgataac
tacaccatcgtcgatcttgtgggaaaagtggccgagttggctgaaaagtatgctccagat
aacgagtggttcattcagactatgaacgcagtgttctctctcggtggtgacctgatgcag
ccggatatccccaacaacttcctcaggctgctggaagagggttcagacgtggaggaggag
gaccggcagctcaggctgtatgcagtggactcgtatatggcagtgctgaagggcgactgt
tcacacctgccccagtgtttcctacaagtcatcagctgggtgcttggagagtactcctgc
gtgagggaaggcctggatcagcgtgaggtcgtggtgctcctgaagaagctgttggagcag
agaggagtgagctcagagaccaggagctgggtgctgtgtgctctcactaagctgtgtacg
agctctggatctgcagagctggtactggagctggcagagagctcggcctcgtccctggac
acggttctgcgccagcaggcttatgagcttctgtgtctcagccgggactcgcagctccac
gctcgggtactgcaccaatccagagccagcacgcaggtggactcctctctctcatttcta
gatgggtttgtatctgaagctctagctgcaggagctgctccgtataaaccccctcatcag
agacaggaagagctgtgtcagcagagagcgctgagtttggagccgtacggactgtctctg
cctgtgggcatgtcctcttgtacgctcacagatagacagtctccaactctcctgtctgtg
agttctggcctctctggtaacagcactgaaccatcccttaggacagaagcgagcacgctc
gtgttggacggtgtgaagagggtgtgggggaaggagggttatctgtctcagaaagagtct
tcagaaacgtcggcggttgtagacgagctgaagagtgtacttcagtcatgcaaccaggaa
gtggctacacacgctccccagccccagcttgagcctccacacgtggaccaggagaagcag
cagctggcgtcgtctctgtttgttggactgggctctcaaaactccatatctctgttggag
aaaactgaggctccagctcctcgattcagacgtaaacaccgccaccacgagtcagcagca
tcatcatcatcatcatcgagcaccagagagacatccacggactcctctcagtcttcccgg
cgcaggacggacgccttatacgacagcttgctggaagaggagccggttacacacccgcag
gactcaaaccacacgtctaccctgatgtccactacagtaaacggcagctgtgatacgacg
cggcccagccagacaaccaatggtttgggtgaaaatgaagcagacactgctgataggctg
ctgatcagacctgacgctccagcggaccaagcctcagtagcgcctcaaaacggttgtcct
gataccactgttctacacttaccgtctgaattggaagacctgcctcgctctgacgttatc
agcttgacctctgacccccacctgtccgtctcttgctgccgcgtctacagagaagatgct
ctgctgcttgtgctgttcgcctgcaacaccacagagacgccgctccgcgatgtcgccgtt
gaactgagctgtgaggagctggagatggcgagtctaagaggaaacgtgatggagcgtttg
gacggcagggattcatcagtgtgccgttacactctgctgatggagagacctcacattcaa
gtgaccttcagaggagcggtgttgtaccaaacacagtccggacattcacacactctgctg
ttctctggccatctctccactgctgacttcataaggccactgatgctgagcacagaggag
tatggtaaattgtggctgtccttctctaatgatgtgaagcagaacctgaaactgctgacc
ggtgctagaggacctctcattaccactctcgacgctcttcaggaaagcctccggctacac
acggtgcacatcatcggttcagagggcatcgtggcctgtcgtctgctgagtggcgccccc
tgtctgatgcactgtcgtgtacatggctcctctctggctgtatggctgcgttctcctctg
aatgctttccctgactgtctcctctatcactgccagagagtcctgcaagaaccctga
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