Ictalurus punctatus (channel catfish): 108275290
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Entry
108275290 CDS
T04658
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04510
Focal adhesion
ipu04512
ECM-receptor interaction
ipu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108275290
04518 Integrin signaling
108275290
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108275290
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Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
LAMININ_IV_B
LAMB4
F5_F8_type_C
ATPTG10
Motif
Other DBs
NCBI-GeneID:
108275290
NCBI-ProteinID:
XP_017341502
Ensembl:
ENSIPUG00000020020
UniProt:
A0A2D0SGW1
LinkDB
All DBs
Position
14:17063159..17084680
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AA seq
1855 aa
AA seq
DB search
MIFTAKATMGRRWMSAVLLLFLVVPAHLQEECEGSSCHPTLGDLMVGRAAQLSASSTCGL
NGPQNYCIVGYLEDEQKCFTCDSRSPYNRYNNPNSHHIENIITTFEPERKMKWWQSENGV
HQVSIQLDLETVFQFSHLVMTFKSFRPAAMLVERSKDFGRTWKVFQYFSADCATDFPRIS
AGPAEAIDDLICDSRYSGAEPSTDGEVVLKALDPHFDIENPFDPTIQELITMTNLRVNFT
RLLTLGDDLLGRKRRNPQEKYYYALYEMVVRGSCFCNGHASQCMPVYNLRGDTLNEPGMV
HGRCVCQHNTMGNNCEKCQDFYNDAPWRPAGSNDPNVCRRCNCNGHSERCHFDLQRYITT
GQVSGGVCEDCRNNRMGAQCELCKPHYYKDPLRSLNDPYACIPCACHSAGSVDGGLCDPL
SGQCVCKQNVEGELCDRCKTGFYRLSQEDPSGCQRCMCNFLGTISTSPCDQNTGQCICDH
FAHGPECDQCVPGYWGLGNTVYGCLLCDCDIGGAFTSLCASESGQCQCRANMVGLHCSEP
APGYFLAPLDFYLYEAENAAPLDTKCSSDLVRPDATPVPPLYPTTSRPVSYCPPGTIARE
PTPPAYYKPEPTVQQPYDPYPSEPSTYENSWPPVAYHTLHPAVTLPSCVSYFRSRGHDVE
FRDGRFVVVKRESRRKRRQGQSTIPLQPGYLHQVILRPHTPDESIYWTGPGVVRVQDGAG
LRFIVTNIPLTLNYHLVVRYEPQSTEDWTASVKIVPLDSVDENCPFDPSEKTFTLPSTSR
AAMLDYSVCLSSGVRYYVDITFENPDPYCSSHILIDSMGLIPKMESLPNFCSDAALAQYQ
QYRCVELGAQAGEHTLPEVCEKLVASMSAYIHNGAIPCRCNLEGSFSSSCSKFRGHCDCK
PNVIGRCCDTCAPLTYGFGQNGCSPCNCEPLGSKAEFCDHKTGQCQCHNGVTGRRCDECL
PGYYGFPNCRRCQCNGLADLCDQITGVCLNCRGHSTGPNCERCIEGYFGDPVEREPCKPC
LCPDMKGSGRFFANSCRKDPNSITLTCQCKTGHQGLHCDKCAPGYYGNLLLPGTSCKECR
CNNNIDPNDGEACDALTGKCLRCLHNTFGPQCQKCKPGYYGNALLQDCRECSCDRQGTDV
TKCPLGSPCICDKVTGQCPCRRGVEGIRCDRCEDGYWNLSGNSGCKPCNCHTGHSVSNLC
DKITGQCPCETGYGGKQCKECAANHFGNPDIQCISCDCDMQGSVYPGCDPDTGECLCLPG
VSGNFCEKCAPGYDPVFPACEPCHPCYHLWGENATDISEAMENMQSLLSKHGGNLLLSEM
RHREKIQNLNEKLKSLISMLSYDQDDLGSIEDFLNQIRNLTETTDPNTIIIDPSKLLDTE
IENIDHELKRLLDDLQKKIKDTQKIDLKHLHEILEKIRKLHSDFLKDEERAKKARNMIDT
SRQTRHDTKKELAKCQLRPLDVLEKKVKGLSVAKLNEEICGAPGDANCEKAVCGGALCGK
CGGPSCTGSLPVALNATDTANKIKAGIQSLLQNLTEADTKIKDIKNINKDVKSKAQNMMN
KIIKSKNKFEKAKNDTKKLIESVREYLRAETMEPEDIDKVASAVLAIKLPSSPDEIKEMI
QDIQKTMENFTHITEDLENLEDQAKLAKDLKNKANKILNRTKDIDVSDIEKTLNDTAQLH
NKIKQKLNESKDNIYVTAKLFDQSTRKLKNAEDNLNMSQTKMLQEEIEALKNKTEINRAQ
TLEAKTIADAALVNVTDANKDLEEVEEKLERLKNNTQGLNDTITEHLKNITMEAENMAKD
VETKMKQIEVLEKRIQNAVEYKMNKMKELEVLLAEAKSLQEFIVEKVDNYSQCGS
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atgatttttacagccaaagcaacaatgggccgaaggtggatgtctgcagtgctgctcctt
tttctggtggtgccagctcacttacaggaagaatgtgagggcagctcgtgccaccccacc
ctaggtgatcttatggtgggccgtgctgctcaactctctgcctcatctacctgtggccta
aatggaccccagaactattgcattgtgggatacctggaggatgaacagaaatgtttcacc
tgtgactcaaggagcccctacaatcgttacaacaaccctaatagccatcatatcgaaaat
atcattaccacctttgagccagagcgtaagatgaaatggtggcagtctgagaatggtgtg
catcaagtcagcattcaactagacttggagactgtgtttcagtttagccatttagtcatg
acattcaagagtttcagacctgctgcaatgctagtggagaggtcaaaggattttggtcgt
acctggaaagtgtttcaatacttctcggcagactgtgctaccgacttccccagaatctca
gcaggcccggcagaagctatagacgacctcatctgtgacagccgctactctggagctgag
ccttctactgatggcgaagtggtgttaaaggctttggacccccactttgatattgaaaat
ccatttgaccctaccattcaagagctcatcaccatgactaatctacgagtgaactttaca
cgtttactcacactgggtgacgacttgttggggaggaagaggaggaacccacaggagaaa
tattactacgctctctatgagatggtggtcagagggagctgcttctgcaatggccatgcc
agccagtgtatgcctgtttataacttgcgtggagatacattgaatgaaccaggcatggtt
catgggcgatgtgtgtgtcaacataacaccatggggaacaactgtgagaagtgtcaggat
ttttacaatgatgccccctggaggccagctggaagcaatgacccaaatgtttgcagaagg
tgcaactgcaatggccactctgagcgatgccattttgacctacagcgctacataaccact
ggacaggtcagtggtggtgtgtgtgaggactgcagaaacaatcgcatgggcgctcagtgt
gagctgtgcaagccacactactacaaggaccctctgcgttctctaaatgatccttatgcc
tgtataccttgcgcctgccactctgcagggtctgtggatggtgggttgtgtgatccattg
agtggtcagtgtgtgtgtaagcagaatgtagagggtgagctctgtgaccggtgcaagact
ggattctatagactcagccaggaagaccccagtggctgtcagaggtgtatgtgtaacttc
ttgggcactataagcacctctccatgtgaccagaacacaggccagtgtatctgtgaccac
tttgcccatggaccagagtgtgaccagtgtgtaccaggttactggggacttggaaataca
gtctatggttgtctactttgtgactgtgacataggaggagccttcacttctctgtgcgcc
tcagagagtggccagtgtcagtgcagagccaatatggtgggacttcactgtagtgaaccg
gctcctggttacttcctggcccctcttgatttctatctgtatgaagctgaaaatgctgct
cctctggacaccaaatgctcctctgacctggttagacccgatgctacccctgtacctccc
ttgtatcctactacatctcgtccagtttcctactgtcccccaggaaccatagctcgtgag
cctacaccaccggcttattacaaacccgagcctacagtgcagcagccttatgacccctac
ccctctgaaccttctacatatgagaattcatggcctcctgtagcatatcacactttacat
cctgctgtcactctgcctagctgtgtgagctacttcagaagcagaggccatgatgttgag
ttcagggatgggagatttgtggtggttaagcgtgagagccgccgaaaacgtagacaaggc
cagagcaccattcccctgcagccaggatacctccatcaggtcatcctacgaccacatacc
ccagatgaatctatttattggactggaccgggagttgtgcgggttcaagatggagcagga
ctccgattcattgtcaccaacatcccgttaactcttaactatcatcttgttgttcgctat
gagccacagtccacagaggattggacagccagtgtaaaaattgtgccattagactctgtt
gatgaaaattgtccatttgatccatcggagaaaacatttacacttcctagcactagcagg
gcagccatgttggattattctgtatgtctcagctctggtgtgaggtactatgtggatatc
acatttgaaaatcctgacccttactgcagctcacatattctaattgattctatgggactt
attccaaagatggagtctctgccaaatttctgttctgatgcagccctggcccaataccag
cagtatcgctgtgtggagttgggtgcacaggcaggagaacataccctacctgaggtgtgt
gaaaaactggttgctagcatgtcagcatacatccataatggcgcaattccttgtagatgt
aatcttgaggggtcgttcagctcatcctgcagtaaatttagaggacactgtgactgcaaa
cccaatgtgattggtcgctgctgcgacacctgtgcccctttgacctatgggtttggacaa
aatggttgctcaccatgtaactgtgagccattgggttccaaagctgagttctgtgaccat
aaaaccggacagtgccaatgccataatggggtcacaggccgacgatgtgatgagtgtcta
cctggatactatggttttcctaactgtagacgttgccagtgtaacgggttggctgacctc
tgtgaccagattactggagtctgtctaaactgcagggggcattcaactgggcccaactgt
gaaaggtgtattgaaggttactttggtgatcctgtagaaagggaaccctgcaagccgtgc
ctctgtccagacatgaaaggcagcggccgtttctttgccaactcctgcagaaaggacccg
aattctataaccttgacctgtcaatgcaagacagggcatcaaggcttacactgtgataag
tgtgcacctggttactacggtaacctgcttttgccaggcactagctgcaaagagtgtcgc
tgcaacaacaacattgatcccaatgatggcgaggcatgtgatgctttaactggcaagtgt
ctacgctgcttgcataacacttttgggcctcagtgccagaagtgtaaaccaggatactac
ggcaacgcactgctccaggactgcagagaatgctcgtgtgatcgtcagggcacagatgtg
actaaatgcccactgggcagcccctgcatatgtgataaggtgactgggcagtgcccatgt
cgtcgtggtgtggaaggcattcggtgtgatcgttgtgaggatggatactggaatctgagt
ggaaattctgggtgtaagccctgtaactgccacacaggccactctgtcagcaatctgtgt
gacaagattactggccagtgtccttgtgaaacaggatatggtggtaaacagtgcaaggag
tgtgcagccaatcattttggaaaccctgacattcaatgcatatcctgcgactgtgacatg
cagggctctgtctaccccggctgtgatcctgacactggcgagtgtctgtgtctgcctgga
gtaagtggcaatttctgtgaaaagtgtgccccagggtatgatccggttttccctgcctgt
gagccctgccatccttgttatcatctatggggagaaaatgccacagacatctcagaggct
atggaaaacatgcagtccttgctctctaaacatggaggaaatctgttactcagtgaaatg
cgacaccgggaaaagatacaaaatttgaatgagaagcttaagagcctgataagcatgcta
agctatgaccaggacgatcttggaagcatagaagatttcctgaatcaaattaggaactta
acagaaaccacagatccaaacacaatcattattgatccatctaagctgctggacactgaa
attgaaaacattgatcatgagctcaagaggttactggatgatctgcaaaagaaaattaaa
gatacccaaaaaattgatctaaaacatttacatgagattctggagaagatccgtaagctc
catagtgatttcctgaaagatgaagaacgggcgaagaaggcaagaaatatgatagacact
tccagacagaccagacatgacacaaaaaaagaactggccaaatgccagctgaggcccttg
gatgtactggagaagaaggtcaaagggctgagtgtggccaagcttaatgaggagatttgt
ggagcaccaggtgatgcaaactgtgaaaaggctgtgtgtggcggtgctctgtgcgggaag
tgtggtggaccatcttgtacaggtagtctacctgtcgccctcaacgccacagacacagca
aataagatcaaagcaggcattcaaagtctccttcaaaatctcacagaggcagacacaaag
atcaaagacataaaaaatataaataaagatgtgaaaagcaaggcacagaacatgatgaat
aaaatcatcaagagcaagaacaagtttgaaaaggccaagaatgacacaaagaaacttata
gagagtgtcagggaatacctcagagcagagacaatggaaccggaagacatcgacaaggta
gcctctgctgtgttggctattaagcttcctagttctccagatgagatcaaggagatgatc
caggatattcagaaaacgatggaaaacttcacacacattactgaagacctggagaacttg
gaggaccaggctaaattagctaaagacttgaaaaataaggccaataaaatcctaaacaga
actaaggacattgatgtcagtgacattgagaaaaccttgaatgacactgcccaactccac
aacaagatcaagcagaagctaaatgagagcaaagacaacatatatgttactgctaaatta
tttgaccagagcaccagaaaactaaagaatgctgaagataatttaaacatgtctcagacc
aaaatgctccaagaggaaattgaggctctgaagaacaaaacagaaataaatcgagctcag
actttggaggcaaaaactatagctgatgcagcattagtcaatgttacagatgctaacaag
gatcttgaggaagtagaggaaaagttagaaagactgaaaaacaacacccagggtctaaat
gatacaataactgagcacctgaagaacataacaatggaggctgaaaatatggcaaaagat
gttgaaactaaaatgaagcaaattgaagtcttggagaaaaggattcaaaatgcagtagaa
tataaaatgaataaaatgaaagaactggaagttctgttggcggaggcgaagagcctgcag
gaatttattgttgaaaaagtggacaattattcgcagtgtggctcctaa
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integrated database retrieval system