Ictalurus punctatus (channel catfish): 108275318
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Entry
108275318 CDS
T04658
Name
(RefSeq) protein fem-1 homolog B
KO
K10349
protein fem-1 homolog B
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108275318
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
108275318
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
108275318
NCBI-ProteinID:
XP_053541716
Ensembl:
ENSIPUG00000012465
UniProt:
A0A9F7RGF4
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Position
14:20630692..20634764
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AA seq
627 aa
AA seq
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MESLADYVYKAASEGRVLTLAALLLNHSASETRYLLDYVTQLAGQRSTPLIIAARNGHDK
VVRLLLDHYRVDTEQTGTVRFDGYVIDGATALWCAAGAGHFEVVRLLVSHNANVNHTTLT
NSTPLRAACFDGRLDIVRYLVKHNADISIANKYDNTCLMIAAYKGHPDVVRFLLEENADP
NAKAQCGATALHFAAEAGHLEIVKELVRCQAAMVVNGHGMTPLKMAAESCKADVVELLLS
HADCDSHSRIEALELLGASFANDRENYDILKTYHYLYLAMLERYRNPERVIAKELPPPVE
AYGGRMECRTPQDLEAIRQDRDALHMEGLMVRERILGSDSVDVSHPIIYRGAVYADNMEF
EQCIKLWLHALHLRQRSNRNTHKDLLRFAQVFSQMVHLKEPVQAPDVEQVLCCSVLEIRR
SMARLETASEAERPACSDSYESNIFTFLYLVCISTKTQCDNEDRARINKQIYDLIRLDPR
TREGSSLLHLAASSSTPVDDFHTNDVCSFPNAQVTKILLDCGAQVNCVDNEGNSPLHLIV
QYNRPISDFLTLHAIIISLVEAGAHTDMTNKQKKTPLEKSTTGVSEILLKTQMKMSLKCL
AARAVRQHHILYRNQIPKSLEEFVEFH
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgttggcagactacgtttataaagcggccagtgaaggcagagtcctgacccta
gctgctcttttactcaaccattctgcctcggagactcggtacctgttggactatgtaacc
cagctggctggtcaacgctccactcctctcatcatagcagcaaggaacggccatgacaaa
gtggtccggctccttctggaccactacagagtggacactgagcagaccgggacagtcagg
tttgacgggtatgtgatcgacggagccacggcgctctggtgcgcagcaggtgctggacac
ttcgaagtcgtgcggcttctcgtgtctcacaacgccaacgtaaaccacaccaccctgacc
aactccacccctctcagggctgcctgcttcgacggtcggctagacatcgtgcgctacctg
gtgaaacataacgccgacatcagcattgccaataagtatgacaatacctgcttgatgata
gctgcttataagggacacccagacgtggtgcgctttttgcttgaggaaaacgccgaccct
aacgcgaaggcccagtgcggcgccacggcgctgcacttcgccgccgaggctggccatctg
gaaatcgtgaaggagctggtgcgatgtcaggcagccatggtggtgaacggccacggcatg
acgccgctcaaaatggcggcagaaagctgcaaggcagacgttgttgagttgcttctgtcg
catgctgactgcgactctcacagccgtatcgaagcgttagagctgcttggagcttccttt
gctaacgaccgtgagaattatgacatcctcaagacataccattacttgtatctggccatg
ctggagcgctaccgcaaccctgaaagggtcattgccaaagagctcccaccacccgtggaa
gcttacggtggccgcatggagtgtaggacccctcaggatctggaggccatcaggcaggac
cgtgatgcgctacacatggaaggactgatggtccgtgaacgcatccttggatcggacagc
gtagacgtttcgcatcccatcatataccgtggtgccgtgtatgccgacaacatggagttt
gaacagtgcattaagctgtggctacatgccttgcacctgcgccaacgaagcaaccgtaac
acgcacaaggacctcttgcgctttgcacaagttttttcacagatggtacacctgaaggag
ccagttcaggcgcccgacgtcgagcaggtgttgtgctgcagtgtcttggagatccggcgc
agcatggcgcgcttggaaacggcctccgaggctgagcgtccagcgtgctctgacagctac
gagtcaaacatttttacatttctctacctggtgtgcatctccaccaagacgcagtgcgac
aacgaggaccgtgcacgcatcaacaagcaaatttacgatctaatccgactcgacccgcgc
acccgagaaggctcgtcgctgctccacctggccgccagctccagcactccagtggatgat
ttccacacgaacgacgtgtgcagcttccccaatgcgcaagtcactaagatactactggac
tgtggcgcacaggtgaactgcgtagataatgaaggaaacagtcctctgcacctcatcgtg
cagtacaatcggcccatcagtgacttcctcaccctgcacgccatcatcatcagtctagtg
gaggccggagctcacactgacatgaccaacaagcagaagaagacgccgttggagaagagc
actacgggtgtctcggagatcctactgaaaacgcagatgaaaatgagtctaaagtgcctg
gctgctcgggccgtccgacagcatcacatcctctaccgaaaccagattcctaaaagccta
gaggagtttgttgagtttcattaa
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