Ictalurus punctatus (channel catfish): 108275319
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Entry
108275319 CDS
T04658
Symbol
afg3l1
Name
(RefSeq) AFG3-like protein 1
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108275319 (afg3l1)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ipu03110
]
108275319 (afg3l1)
Peptidases and inhibitors [BR:
ipu01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
108275319 (afg3l1)
Chaperones and folding catalysts [BR:
ipu03110
]
Other chaperones and cochaperones
AAA proteases
108275319 (afg3l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_22
AAA_5
AAA_16
TIP49
AAA_2
RuvB_N
AAA_14
nSTAND3
AAA_28
AAA_17
ThcOx
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
108275319
NCBI-ProteinID:
XP_017341561
Ensembl:
ENSIPUG00000016809
UniProt:
A0A2D0SGF6
LinkDB
All DBs
Position
14:18415869..18423994
Genome browser
AA seq
771 aa
AA seq
DB search
MALMLGLLSAASAPLRFGLRRTLQRSSFTAALGKLSPTLLNGQTNRNLTLNGLKPLWTVN
NPWSTSILYSVDSSKDGQPGGPERQSSGGGEGGGKKGGKRDWKSRLLQGDIPWDDNDFRY
MAVTVAGVASALLYLYLRDPSNEITWKDFVHRYLARGLVDRLEVINKQFVRVLLVPGADT
SDGGYVWFNIGSVDTFERNLEAAHYELGLEPSNRVAVVYRSKSDGSFIKSIIPTLLLIGF
LLFTLRRASMGGPGGGGKGRGLFGMSESPAKMMKDSIDVKFKDVAGCEEAKLEILEFVNF
LKNPQQYQDLGAKIPKGAVLSGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGP
ARVRDMFTMARKNAPCILFIDEIDAVGRKRGGGNFGGQSEQENTLNQLLVEMDGFNSSTN
VVVLAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLDPNLDSNALA
RKMAASTPGFTGADIANVCNEAALIAARYLSEAVNTKHFEQAIDRVIGGLEKKTQVLQPN
EKKTVAYHEAGHAIVGWFLEHADPLLKVSIIPRGKGLGYAQYLPKEQYLYTREQLFDRMC
MMLGGRVAEMVFFGRITTGAQDDLKKVTQSAYAQIVQFGMSEKVGQVSFDMPRQGDMVLE
KPYSEATAELIDQEVRELVDNAYQRTLRLITEKRDLVEKVGKRLLEKEVLAKADMVELLG
PRPFEEKSTYEEFVDGTGSFEEDTSLPEGLKDWNKEKNLDEVETYQKKQAA
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggctctgatgctgggcttgctctcagcggcttctgctcccctgcgctttggactgaga
aggactttacaacgctcttcattcactgctgctcttggaaaactttcaccaaccctatta
aacggccaaactaacaggaatctgacactgaatggcctgaagccgctgtggactgtaaat
aatccctggtctacatctatactttactcagtagattcttctaaagatggacaaccaggt
ggaccagaacgtcagtcgagtggaggaggagaaggaggaggaaagaaaggagggaagaga
gactggaaaagccgtttactacagggtgatattccatgggatgataatgatttccgctac
atggcggtcacagtggcaggcgttgcatctgctcttctctacttgtacctccgtgatcca
agcaatgagattacttggaaagactttgtccatcgctacctggccagaggactcgttgat
agattggaggtcattaacaagcaatttgtcagggtcctcctagtcccaggagctgatact
tcagatggaggctacgtatggttcaacattggcagtgtagacacatttgagagaaatcta
gaggcagctcactatgagttgggactggagccatcgaacagagtggcggtagtgtaccgc
tcaaagagtgatgggtctttcattaagagcatcattcctactttgctgctgattggtttt
ctgctcttcaccctacgacgagcatcaatgggtgggcccggaggtggaggaaaggggcgt
ggacttttcggcatgagtgaatcccctgccaagatgatgaaggacagcatagacgtgaag
tttaaagatgtagccgggtgtgaggaggcaaagctggagatcctagaattcgtcaacttt
ctgaagaaccctcaacagtaccaggacctgggagctaagatcccaaagggagctgtgctg
tcaggacctccaggaacaggcaagactctgctggccaaagccactgctggagaggccaat
gtcccctttattaccgtcaacggatcagaattccttgagatgtttgtgggagtcggtcca
gccagagtgagagacatgttcactatggcaaggaagaatgctccatgcatccttttcata
gatgagattgatgcggtcggcaggaagagaggtggaggaaactttggtggtcagagtgag
caggagaacaccctcaaccagctgcttgtggaaatggacggtttcaacagcagtacaaat
gttgtggtcttggctggcacaaaccgacctgacatcctggatcctgctctgatgaggcct
ggtagatttgaccggcagatttacataggtcctcctgatataaagggtagagcctctatc
tttaaggttcacctgaggcccctcaaactggacccaaatctagactcaaatgcccttgct
aggaaaatggctgcttccacccctggtttcacaggagctgacattgcgaacgtgtgtaat
gaagccgccctaattgctgccagatatctcagtgaagctgtcaataccaaacactttgaa
caggccattgaccgagtgatcggaggtctcgaaaaaaagacacaagtcttgcagcccaat
gagaagaagacggtggcgtatcatgaggccggacatgctatagtcggctggttcctcgag
cacgctgacccactactcaaggtttctattattccacgtgggaaaggtctgggctatgct
cagtacctccctaaagagcagtacctgtacacgcgggagcagctgtttgacaggatgtgc
atgatgctgggtggtcgcgtggctgagatggttttctttggcaggattaccactggcgct
caggatgacctgaagaaagtcacgcaatcagcctacgctcagatcgtgcagtttgggatg
agcgaaaaggtaggccaggtgtcgtttgatatgccaaggcagggcgacatggtgttagag
aagccctacagcgaggccacggcggagctcatcgatcaggaggtcagagaactggtggac
aacgcttaccaaagaactctgaggctcatcactgagaaacgtgacctggttgaaaaggtg
ggaaaacgtctcctggaaaaagaggtgctggccaaagctgacatggtggagctgctcggt
cccaggccatttgaggagaaatctacctatgaggagtttgtagatggcacaggcagcttt
gaggaggacacgagcctaccggaggggctgaaggactggaacaaggaaaagaacctggac
gaggtggaaacctaccaaaagaaacaggcagcttaa
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