Ictalurus punctatus (channel catfish): 108275337
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Entry
108275337 CDS
T04658
Name
(RefSeq) TBC1 domain family member 2A isoform X1
KO
K20165
TBC1 domain family member 2A
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108275337
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108275337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_alsin
HAUS1
TMF_TATA_bd
PH_3
PH_8
PH_13
Death
Bestrophin-like
Motif
Other DBs
NCBI-GeneID:
108275337
NCBI-ProteinID:
XP_017341585
Ensembl:
ENSIPUG00000007033
UniProt:
A0A2D0SH36
LinkDB
All DBs
Position
14:10565403..10585646
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AA seq
975 aa
AA seq
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MEGEGSSKGNSNSADMSQLLPLLAETHKSVAEGERASVVESLEEKHTEIMGLSTGNEGKE
GSQVVNSRPESTAVCLRDSELSSKTKLCGYLHKQAGPLKTWKCRWFTYEEKKCQLFYYRT
AQDLNPLGKVELRNATFSYPLQGEEGTFHIQTPERTFILKAANRDAKMYWLQQLQLRRWQ
HREQLCADSPLPMPEKPTQDDQQYLDTCPENFLPMVKIPSGLVGVEAANVPVQTNPLNVS
IKHPLIEIQNSVQSFLLRRPSMEMSRSVFWVEPPATLADTPGINPSSSTTTPEISHAQTS
PPSSGLDPEVECEKPCEKLLTHGSLTLPNGKLKKTNSATFPFDRKEANTVDLLSRLKQEN
LTLAVEVQAQKELVWLLHKALEAAQLEKRACAQYLAAESEQERLELVRHSERCTTDLRER
LEQLRRENEGLRRSLEERDAHVKELQDNVKMLMEKNQAKQEVIVKLSEQMSACIADPRRT
ISSDRISSESLRQLVQEMDNLKDDMEAYKTQNKFLNSEIYQLTKLWQNSSEQEKSLMVKC
AYLEASNCQMESRYLGVLRKLQENNELNAGQSAVIRKLIEEALQADQKDVIRFDTIREYD
EYGFKIIPDYEVEDMKLLAKIQALEIRSHNLLQQETGDRSLLARWTQFLGGRSPDVLSLS
EELKTLVRAGIPRQYRSCMWRWMVRLRTNTLRQGHPDLFQQLCEKSRATPHSAARQIQLD
LHRTLTTNQSFSSPSSPMLQKLQRVLLAFSWQNPAVGYCQGLNRLAAIALLVLQSEEEAF
WCLVAIVQFIMPKDYYTKTLLGSQADQRVFKDFMAEKLPRLVAHLDEYNVDVSLVTFNWF
LVVFVESLPSDILLKVWDAFLYEGTKVIFRYALAIFKYKEEDILKIHDNVEIYQYLRFFT
KTVTDGRKLTSIAFLDLNPFRMKHVRNRHAVHLQRLKAELRELEKLQKEYSSENSQRKDS
ILDLDLIPSEDDDDA
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagagggaagctctaaaggaaattccaatagtgctgacatgtctcaattactt
ccccttctggcagaaacacataagtctgtagcagaaggagagagggccagtgtggttgag
agtctggaggagaaacacacagagataatgggactgtcgacagggaatgagggaaaggag
ggctcacaggttgtcaattcaaggccagagagcactgctgtctgtttaagagattctgag
ttgtcctctaaaactaagctttgtggatacctccacaagcaggctgggcccctgaaaacc
tggaaatgtcgttggttcacctacgaggagaagaagtgtcagctgttttattatcgcact
gcacaggacttgaatcctcttggcaaagtggagctgcggaatgccacgtttagctaccca
ctgcaaggagaggaagggaccttccacattcagacacctgagcgcactttcatacttaag
gcagcaaacagagatgctaagatgtactggctccagcagctgcagctgagacgttggcag
cacagagagcagctttgtgcagattccccactgccaatgccagagaagcccacacaggat
gaccagcagtatttagacacctgccctgaaaacttcctgcccatggtgaagatcccgtcc
ggtctggtcggagtggaagcagccaatgttcctgtacaaacaaacccactcaacgtgtcc
attaaacacccactcattgagatacaaaactcagtacagagctttctccttcgccggcca
tctatggaaatgagccgtagtgtattttgggtagaaccaccagccaccctggctgatacc
ccaggaattaatccctcctccagtacaactacccctgaaatctcccatgcccagacatca
cctccaagctcgggtctggatcctgaagtggagtgtgagaagccgtgtgaaaaactcctg
acccacggttctctaacactacccaatgggaaacttaagaaaacaaactctgccaccttt
ccattcgaccgcaaagaggcaaacactgttgaccttctgtcacgccttaaacaggagaat
ctcacactggccgtggaggtccaagcccagaaggaattggtgtggctgctgcacaaagcc
ctggaggcagctcagctggagaagcgtgcgtgtgctcagtacctggcagctgagagcgag
caggagcgtctggagttggtgcgtcacagcgagcgctgcaccacagacctgcgtgagcgt
ctggagcagctgcggcgtgagaacgagggactaaggagaagcctggaggagagggatgca
catgtgaaagagctacaggacaacgtgaagatgctcatggagaagaaccaggccaagcag
gaggtcatcgtcaaactatctgagcaaatgtctgcatgcattgctgacccgagacgcacc
atctcttctgaccgtatcagctcagagagcctcaggcagcttgtacaggagatggacaac
ctcaaggatgacatggaagcttacaaaacccagaacaagttcctgaactcagagatctac
cagctgaccaaactgtggcagaacagctcagagcaggagaaatcgctaatggtgaagtgt
gcctatctggaagccagcaactgtcagatggagagcaggtacctgggagtcctaagaaaa
ctccaggagaataatgaactgaatgccgggcaaagtgctgttatcaggaagttaatagaa
gaggcactacaggccgatcagaaagatgtcatcagattcgacactatcagggaatacgat
gagtacggctttaagatcatccccgactatgaagtggaggacatgaaactgctggctaaa
atccaagccctggagatccgctctcacaatctgctccagcaggaaactggtgaccggtca
cttctggcccgctggactcagtttctgggaggtcgttctcctgatgttctctccttgagt
gaggagctgaagactctggtgcgagcaggaatcccgcgtcagtacaggtcgtgtatgtgg
cgctggatggtgcggctcaggacgaacacactgcgccagggccaccctgaccttttccag
cagctgtgcgagaagagccgagccactccgcactcggcagccaggcagatccagctggac
ctgcaccgcacactcaccaccaaccagagcttctcatcaccctctagtccaatgctgcag
aagctccagagagtcttgctggcgttctcctggcagaacccagctgtcggctactgtcag
ggactcaacagactggccgctattgccctgctggtactgcagagtgaggaggaggctttc
tggtgtctagtggccatagtgcagttcatcatgcctaaggactactacaccaaaactctt
ctgggctctcaggcagaccagcgtgtgtttaaggactttatggcagagaagttgccacgg
ttggtggctcatttagatgaatacaatgtggacgtgtccctcgtcacttttaactggttc
ctggtggtgtttgtggagagtttgcccagtgacatcctgcttaaagtctgggatgctttc
ctctatgaaggcactaaggtgatatttcgatacgcacttgctattttcaaatacaaagag
gaggacattttaaagatccatgacaacgtggaaatctatcagtacctccgtttctttacc
aaaacagtcacagatggcaggaagttgactagcatcgccttcttggatttgaacccgttc
cggatgaagcatgtgaggaaccggcatgctgtgcacctgcagcggcttaaagctgagctc
cgtgaactggaaaaattgcagaaagagtatagctcggagaacagccagcgcaaagacagc
atactggacctggacctcatccccagtgaggatgatgatgatgcatag
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