Ictalurus punctatus (channel catfish): 108275355
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Entry
108275355 CDS
T04658
Name
(RefSeq) protein SPT2 homolog isoform X1
KO
K15193
protein SPT2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108275355
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108275355
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Ortholog
Paralog
GFIT
Motif
Pfam:
SPT2
SPT2_N
Motif
Other DBs
NCBI-GeneID:
108275355
NCBI-ProteinID:
XP_017341619
Ensembl:
ENSIPUG00000005617
UniProt:
A0A2D0SFX3
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All DBs
Position
14:11386068..11392219
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AA seq
634 aa
AA seq
DB search
MDFHSVLSIASEKQGLSSLPKRYSLKPGPPKKDPKVKGVNSSAVQAYLKKQEMEQKKKDL
LKKKQKEELLAKRVELKSDRKARAMASRTKDNFHGYDGTPIVDQPKKRQSKDSRFEEQPG
SDDAYYDEDNSEYAGTDSEPEPEPEPTPIVRPQERSNGSTKMSSVQKKTSAPPKGAPPPM
NFADLLKLAEKKQFEPVELKPTKKTEERLRTAEEIRELELERKAKKQDKGRDVKPVKSSG
HKESKSSLNSQKKNVVDREGISHRSSSEKSSSGISKTPKLHMQTERLHSSAKSSHGSKPS
SSSSGALSGKAAMKGTSSSSSVKQTGPRPKSGEKPTTSSDLNSKKGYPGLPQVKMNSSGS
RSDAASNSCRPSGHGQGIKGSGNTRPSPGNMNKRGPPQKPGKGELPRYSGNPPPRPGINA
PVRSAPAVSSKQAESQQPRPGGSMQGRAVPGGAKLPVNGQSKPSRPLNSMRPVPGRTPCT
VVSETISSKNFAPKQGVAARPPVPQGPRTIIGPTGHRILARPSGPELPAITSSYKRKFEE
EEDYDSEMDDFIDDEEDDQDEISKHIREIFGYDRTRYKDESDYALKFMESSWKEQQKEEA
RSLRLGIKEDEEEMRMEEEEMKRKQTMKAKHKKT
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggatttccacagtgtgctgtccatcgcctccgaaaagcaaggcctgagcagcttaccg
aagaggtacagcttgaaacctggccccccgaaaaaagacccaaaagtgaagggtgtcaat
tcctctgcagtgcaagcgtacttgaagaagcaggagatggaacagaaaaagaaagatctg
ttgaagaaaaagcagaaggaagaactcctggctaagagagtggaattgaaatccgaccgg
aaagcgcgtgccatggcgtctcgcaccaaggacaacttccacggctatgacggcacgccc
attgtagatcagcccaagaaaaggcagagtaaggattcaaggtttgaggaacaaccaggg
agcgatgacgcttattacgatgaagacaattctgaatatgctggcactgactcggaaccg
gaaccggaaccagaaccaacgcctatagtaaggcctcaggaacgcagtaacggttcaacc
aaaatgagcagtgtgcagaaaaaaactagcgctccacccaagggtgctccaccacccatg
aattttgcagatctcttaaagctcgctgagaaaaaacagtttgaacctgtcgagttgaag
ccaacaaagaaaactgaagagaggcttcgcacagccgaggaaattagagagttagaactt
gagcgcaaagctaagaaacaagataaagggagagacgttaaaccagtcaaaagttcaggg
cacaaagaaagcaaatccagcttgaattctcagaagaaaaatgtggttgacagggaagga
atatcacacaggtcatccagtgagaaatcatccagtggaattagcaaaacgccaaagctg
cacatgcagactgagcgactgcacagctctgccaaatcatctcatggatccaaacctagc
tctagctcctcaggtgccttaagtggtaaagctgccatgaagggaacttcatcttcatct
tcagtcaagcaaacagggcccaggcccaagtctggtgaaaagccaaccacctcaagtgac
cttaactccaagaaaggctatccaggactacctcaagtaaaaatgaatagttctgggagt
cgaagtgatgctgcttcaaactcctgtagaccgtcaggtcatgggcaagggattaaggga
tctggaaacaccagacctagtccgggtaacatgaacaagagaggacctcctcaaaagcct
ggaaagggagagttgcctcgatattcaggcaatcctcctccccgaccaggtatcaacgca
cctgtgagatctgcacctgctgtctcctcgaaacaagcagaatctcagcagccacgaccc
gggggtagcatgcagggccgagctgttcccggaggggcaaaactccctgtaaatggacaa
agcaaacctagcagaccattaaacagtatgagaccagttcctggaagaaccccatgtact
gtcgtgtcagagaccatttcatctaaaaactttgcacctaaacaaggagtggctgccagg
cctccagttcctcaggggcccagaacaatcataggaccaacaggtcatagaattttggct
agaccatctggaccagagctaccagcaataacgtctagctacaaacgcaagtttgaggag
gaagaggactatgactctgagatggatgacttcattgatgatgaagaagacgaccaggat
gaaatttcaaaacatatccgagaaatcttcggctatgatcggaccagatacaaagatgag
agtgactatgcgttgaagtttatggagagcagttggaaagaacaacagaaggaggaggcg
cgaagtttgcgcttgggtattaaagaagacgaagaagagatgcgtatggaggaggaggag
atgaaaagaaagcaaacgatgaaagcaaaacacaaaaagacttga
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