Ictalurus punctatus (channel catfish): 108275365
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Entry
108275365 CDS
T04658
Symbol
rragcb
Name
(RefSeq) ras-related GTP binding Cb
KO
K16186
Ras-related GTP-binding protein C/D
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04140
Autophagy - animal
ipu04142
Lysosome biogenesis
ipu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108275365 (rragcb)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
108275365 (rragcb)
04140 Autophagy - animal
108275365 (rragcb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gtr1_RagA
Arf
SRPRB
Roc
GTP_EFTU
MMR_HSR1
Ras
AAA_14
Motif
Other DBs
NCBI-GeneID:
108275365
NCBI-ProteinID:
XP_017341632
Ensembl:
ENSIPUG00000005440
UniProt:
A0A2D0SFY3
LinkDB
All DBs
Position
14:complement(25550378..25558881)
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AA seq
423 aa
AA seq
DB search
MSVQQGRESLNTGANHHHHHHHHHHHHLPLHPHLHPLPPPPPHLHVRKEEGLCRDGLGYG
VEQDSEEEEDILAAQDSDQPRILLMGLRRSGKSSIQKVVFHKMSPSETLFLESTNKIFKD
DISSSSFVHFQIWDFPGQVDFLDPTFDYEMIFRGTGALIFVIDAQDDYMEALGRLHLTVS
RAFRVNPNINFEVFVHKVDGLSDDHKIETQRDIHQRANDDLADASLDKLHLSLYLTSIYD
HSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVLSKIYVATDSSPVDMQSY
ELCCDMIDVVLDVSCIYGLKEDGSGTAYDEDSLAIIKLNNTTVLYLKEVTKFLALVCILR
EESFEKKGLIDYNFHCLRKAIHEVFEMTVVRRNCLEDLLGDSGGSSSSAVKAPVLNGTPR
GLV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgcagcagggcagagagagcctgaataccggggcaaatcatcatcatcatcat
catcaccaccatcaccaccaccttcctctccatcctcacctccatcctcttcctcctcct
cctcctcatcttcatgtccggaaagaggagggtttgtgtagagatggtttgggttacggt
gtagagcaggacagtgaggaagaggaggacattttagctgcacaggacagcgaccagccc
agaatcctgctgatggggctcaggcgcagcggcaagtcctccatacagaaggtggtcttc
cacaagatgtccccgagcgagacgctgttcctggagagcactaacaagatcttcaaagac
gacatcagcagcagctcctttgttcatttccagatctgggatttcccggggcaggtggac
ttcctcgaccccacgtttgattacgagatgattttcagaggcaccggagcgctcatcttc
gtcatcgatgcacaggacgattacatggaggctctgggaaggctacacctcaccgtgtcc
cgcgccttccgagtcaaccccaacatcaacttcgaggtgttcgtgcacaaggtggacggc
ctttcagacgaccacaagatcgagacgcagagagacatccaccagagggctaatgacgac
ctggcagacgccagcctcgacaagctgcacctcagcctttacttgaccagcatctatgac
cactcgatatttgaggcgttcagtaaagtggtgcagaagctcatccctcagctgcccacg
ctggagaacctcctcaacatcttcatatcgaactcagggatcgagaaggcgttcctcttt
gatgttctcagtaagatctacgtggccacagacagctctcctgtggacatgcagtcgtac
gagctgtgctgcgacatgatcgacgtggtcctcgacgtctcctgcatttatgggctgaag
gaggacggcagtggcactgcatatgatgaagactctttggccatcattaagctgaacaac
accactgtgctctacctgaaggaggtcaccaagttcctggcgctggtgtgtatcctgaga
gaggagagcttcgagaagaaaggtctgatagactacaatttccactgtctgaggaaggcc
atacacgaggtgttcgagatgacggtggtccgaaggaactgcttagaagatctgctcggt
gactctggcggcagcagcagcagcgctgttaaagcgccggtgcttaacggcacccctaga
ggcctggtgtga
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