KEGG   Ictalurus punctatus (channel catfish): 108275365
Entry
108275365         CDS       T04658                                 
Symbol
rragcb
Name
(RefSeq) ras-related GTP binding Cb
  KO
K16186  Ras-related GTP-binding protein C/D
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04140  Autophagy - animal
ipu04142  Lysosome biogenesis
ipu04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    108275365 (rragcb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    108275365 (rragcb)
   04140 Autophagy - animal
    108275365 (rragcb)
SSDB
Motif
Pfam: Gtr1_RagA Arf SRPRB Roc GTP_EFTU MMR_HSR1 Ras AAA_14
Other DBs
NCBI-GeneID: 108275365
NCBI-ProteinID: XP_017341632
Ensembl: ENSIPUG00000005440
UniProt: A0A2D0SFY3
LinkDB
Position
14:complement(25550378..25558881)
AA seq 423 aa
MSVQQGRESLNTGANHHHHHHHHHHHHLPLHPHLHPLPPPPPHLHVRKEEGLCRDGLGYG
VEQDSEEEEDILAAQDSDQPRILLMGLRRSGKSSIQKVVFHKMSPSETLFLESTNKIFKD
DISSSSFVHFQIWDFPGQVDFLDPTFDYEMIFRGTGALIFVIDAQDDYMEALGRLHLTVS
RAFRVNPNINFEVFVHKVDGLSDDHKIETQRDIHQRANDDLADASLDKLHLSLYLTSIYD
HSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVLSKIYVATDSSPVDMQSY
ELCCDMIDVVLDVSCIYGLKEDGSGTAYDEDSLAIIKLNNTTVLYLKEVTKFLALVCILR
EESFEKKGLIDYNFHCLRKAIHEVFEMTVVRRNCLEDLLGDSGGSSSSAVKAPVLNGTPR
GLV
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgtcggtgcagcagggcagagagagcctgaataccggggcaaatcatcatcatcatcat
catcaccaccatcaccaccaccttcctctccatcctcacctccatcctcttcctcctcct
cctcctcatcttcatgtccggaaagaggagggtttgtgtagagatggtttgggttacggt
gtagagcaggacagtgaggaagaggaggacattttagctgcacaggacagcgaccagccc
agaatcctgctgatggggctcaggcgcagcggcaagtcctccatacagaaggtggtcttc
cacaagatgtccccgagcgagacgctgttcctggagagcactaacaagatcttcaaagac
gacatcagcagcagctcctttgttcatttccagatctgggatttcccggggcaggtggac
ttcctcgaccccacgtttgattacgagatgattttcagaggcaccggagcgctcatcttc
gtcatcgatgcacaggacgattacatggaggctctgggaaggctacacctcaccgtgtcc
cgcgccttccgagtcaaccccaacatcaacttcgaggtgttcgtgcacaaggtggacggc
ctttcagacgaccacaagatcgagacgcagagagacatccaccagagggctaatgacgac
ctggcagacgccagcctcgacaagctgcacctcagcctttacttgaccagcatctatgac
cactcgatatttgaggcgttcagtaaagtggtgcagaagctcatccctcagctgcccacg
ctggagaacctcctcaacatcttcatatcgaactcagggatcgagaaggcgttcctcttt
gatgttctcagtaagatctacgtggccacagacagctctcctgtggacatgcagtcgtac
gagctgtgctgcgacatgatcgacgtggtcctcgacgtctcctgcatttatgggctgaag
gaggacggcagtggcactgcatatgatgaagactctttggccatcattaagctgaacaac
accactgtgctctacctgaaggaggtcaccaagttcctggcgctggtgtgtatcctgaga
gaggagagcttcgagaagaaaggtctgatagactacaatttccactgtctgaggaaggcc
atacacgaggtgttcgagatgacggtggtccgaaggaactgcttagaagatctgctcggt
gactctggcggcagcagcagcagcgctgttaaagcgccggtgcttaacggcacccctaga
ggcctggtgtga

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