Ictalurus punctatus (channel catfish): 108275377
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Entry
108275377 CDS
T04658
Name
(RefSeq) testican-1
KO
K08136
testican
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ipu00535
]
108275377
Proteoglycans [BR:
ipu00535
]
Extracellular matrix (ECM) proteoglycans
Others
108275377
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GFIT
Motif
Pfam:
SPARC_Ca_bdg
Thyroglobulin_1
Kazal_2
Kazal_1
EF-hand_7
PRC2_EED_ins
Motif
Other DBs
NCBI-GeneID:
108275377
NCBI-ProteinID:
XP_017341647
Ensembl:
ENSIPUG00000008944
UniProt:
A0A2D0SFZ7
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Position
14:complement(8537315..8805698)
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AA seq
470 aa
AA seq
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MLCVLLLPIAAFLLRAEAAVGIIINNNNNNNHHNNNNDGNTADTDKWISDKDKYWSKFRD
DDSFRTWGPSKAQDKEPENRPRRHGELGSKTHSAQAKWRTDEGLDVTKDPCMKVHCPPHK
VCVSQDLQTAICTNHKPPKHSIKPRKGSHLHKHWMGAMNHGKCRTCPVVHPSPVCGSDGH
TYSSKCKLEFQECVSGKSILAKCEGPCPCLPGQEVFKPHTEKNACSDADLRSLASRLKDW
FGVLHMDANRDLKISANDNGQGRFDTSILPICKDSLGWMFNKLDMNYDLLLDQSELSAIY
LDKYELCMRPLFNSCDSFKDGKLSNNEWCYCFQKPDGLPCQNEINRIHTQSRRKSLIGAF
VPRCTEDGYFKATQCHGSTGQCWCVDKYGNEIAGSRKQGNPICEEDQETSGDFGSGGAVI
LLNDQEEEEEPPQNRRRRQKEKRGRLRPHGAIEDDEDEEDDKEDEIGYIW
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcgtgctgctgttacctatcgccgctttcctgctgcgcgcggaggcggcggtc
ggcatcattatcaacaacaacaacaacaacaaccaccacaacaacaacaacgacgggaac
acggcggacacggacaagtggatcagcgacaaggacaagtactggagcaaattccgtgat
gatgattccttcaggacctggggcccaagcaaagcacaagacaaagagccagaaaacagg
cccaggagacatggggaactaggatccaaaacacactcagcgcaggctaaatggaggact
gatgagggtttggacgtcactaaagatccttgtatgaaggtgcactgtcctcctcacaaa
gtgtgtgtgagtcaagacctccaaacagccatctgcaccaatcacaaacctccaaagcac
agcattaagccaaggaaaggcagccatctccataagcactggatgggagcaatgaatcat
gggaaatgtaggacttgtccagttgtccatcctagtccagtgtgtggctcagatggtcat
acctactcctcaaagtgtaagctggagttccaggagtgtgtttcgggaaagagcatctta
gcgaagtgtgaaggaccatgtccctgcctgcctggacaggaagtcttcaagccacacact
gaaaagaatgcttgcagtgatgccgatctgaggagtttggcctctagactaaaggactgg
tttggcgtgttgcacatggatgccaatcgagatctgaagatttctgccaatgacaacggt
caaggacgttttgacaccagcatcctccccatctgtaaggactctcttggttggatgttc
aacaagttggatatgaattacgacctcttgctcgaccagtcagagcttagcgccatttat
ctggacaagtacgagctgtgtatgcgccctcttttcaactcctgtgactcctttaaggat
gggaagctttccaacaacgagtggtgctactgcttccagaaaccagatggtctgccctgt
cagaatgaaataaataggattcacactcaaagccgacggaagtctctcataggagcattt
gtcccacgctgtacagaggacggctactttaaggccacacagtgtcatggcagcacaggc
cagtgttggtgtgttgataaatatgggaatgagattgcaggctccaggaaacaaggcaac
ccaatctgcgaggaggatcaggagacctcaggggattttggcagtggaggagccgtcatt
cttctcaatgaccaggaggaggaggaggagcctccacagaataggcggcgcagacagaag
gagaagaggggcaggctccgcccccatggggccatagaggatgatgaagatgaagaagac
gacaaagaagacgagattggctacatctggtag
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