Ictalurus punctatus (channel catfish): 108275382
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Entry
108275382 CDS
T04658
Symbol
msx2a
Name
(RefSeq) homeobox protein MSH-A
KO
K09341
homeobox protein MSX
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108275382 (msx2a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
108275382 (msx2a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
108275382
NCBI-ProteinID:
XP_017341650
Ensembl:
ENSIPUG00000010256
UniProt:
A0A2D0SHA2
LinkDB
All DBs
Position
14:6796061..6798919
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AA seq
234 aa
AA seq
DB search
MRQGMSTELREDAACSAQRASSLPFSVDALMSRAGSRAPAETPRYSTARATLLYGPPAPE
DCVPSSPVKSEASDRDDATWPKSACSPQPRHLGPSTCSLRKHKTNRKPRTPFTTAQLLAL
ERKFRQKQYLSIAERAEFSSSLCLTETQVKIWFQNRRAKAKRLQEAEMEKLKMAAKPSAH
SGLSFPFPLSSQPQGAAALLYGQSGHYPFRRYMLPMPPLGIYSTPLAYSMYHLS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaaggtatgagcacggagctccgcgaagacgccgcgtgctcggctcagcgcgcg
tcgagtctgccgttcagcgtggacgcgctcatgtctcgcgcaggctccagagctccagcg
gaaacgcctcgctacagcaccgcgcgcgcgacgctcctctacggcccgcctgcgccagag
gattgcgtcccgtcatcgcccgtcaagtcggaagcgtcggatcgagacgacgcgacctgg
ccaaagtccgcgtgctcaccgcagccacgacacttgggtccgagcacatgttctctcaga
aagcacaagacgaatcgtaagcctcgcactccattcacaacagctcagctcctggcgctt
gagcgcaagttccgtcagaagcagtacctctccatcgctgagcgtgccgagttctccagc
tctctctgcctgactgaaacacaggtaaagatctggttccagaacagacgggccaaagcc
aagcgactgcaggaggccgagatggagaagctcaaaatggcggccaagccatcggcacac
tcgggcctctctttcccatttcctctcagcagtcagccacagggagcagcagcgctcctc
tatggacaatcaggacactatcctttccgcaggtacatgctccctatgcctccacttggg
atttactccacgcctttggcctatagtatgtatcatttgtcctga
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integrated database retrieval system
