Ictalurus punctatus (channel catfish): 108275399
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Entry
108275399 CDS
T04658
Symbol
zc3h12ab
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108275399 (zc3h12ab)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
108275399 (zc3h12ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
108275399
NCBI-ProteinID:
XP_017341669
Ensembl:
ENSIPUG00000005852
UniProt:
A0A2D0SG24
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All DBs
Position
14:complement(25337533..25359186)
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AA seq
623 aa
AA seq
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MSIGTSLIPAAFPPVLDTYLEYCSTVCASSFVHADSLTWVSSLCPSKRCVRMEQNQPEEQ
EDPSSELQPQLDLFRKLGFSDAQVRAVLLKLGLHTDTNRILGELIQVRAAETGDSLSPTA
VVPHGESQRKGHRVSSLPAGQEDAAKDEDALKPIVIDGSNVAMSHGNKEVFSCLGIHLAV
KYFLDRGHTDVTVFVPSWRREQPRPDVPITDQQILRELERKKVLVFTPSRRVAGKRVVCY
DDRFIVKLAYEVDGIIVSNDTYRDLQGEKPEWKRFIEERLLMYSFVNDKFMLPDDPLGRH
GPTLENFLLKTPRATKKLPCPYGKKCTYGIKCKFSHPERAKQSQRSLADELREKAKMPSP
MKPSLAGPNPSHGASLEEVMEQKLTLNQSGSLKKAHTSENMLVVKNTPQSTSRKSPSKRD
RSSQYSTTNPDGISASFQEYPDSGLGSYECHGEHQCGGEQRKSKNPSNGRFRYPPTCSQS
LNQSNLQSNPGYHPHHMSIAASQSPNNMPYSFPQYHSYGGAPYPPGNFAQYSVPHEYHHR
SMPPPQSGYWSEPYFGHVPQGPVQGDGTPWTHPLPEKEQVRKKLRAVFNARLVDRAMEMF
PNLMDPQKLAVEIINLQSYEGVL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagtataggcaccagtctcatccctgctgcctttcctccagttttggatacttacctt
gagtattgcagcacagtgtgcgcgtcctccttcgtccacgcagactcactcacatgggtg
tcttcgctctgtccatccaaacggtgtgttagaatggagcaaaatcaacctgaggagcaa
gaggacccgagctctgagcttcagcctcagctagatctgtttaggaagttgggcttctct
gatgctcaggtccgagcagtgctgctcaagctgggcctccacaccgacaccaaccggatt
ctgggagagctgatacaggtgagagcggcagagaccggggattctctcagtccgacagcg
gtggttccacatggtgaaagccagaggaaaggtcacagagtttcatctctacctgctgga
caagaggacgcagccaaggacgaagatgccctcaagccgatagtgatagacggcagcaac
gtagcaatgagtcacgggaacaaggaagttttctcctgcctgggaatccatctggctgtg
aagtacttcctggatcgagggcacacagatgttactgtgtttgtgccgtcatggaggcgg
gaacagcccaggccggacgttccgatcacagatcagcaaattctccgtgagctggaacgg
aaaaaggttctggtcttcactccatcaaggcgtgtggcaggaaagcgggtagtgtgctat
gatgaccgtttcatcgtaaagctggcatacgaggtagatggcatcatcgtgtccaatgat
acctaccgagacctgcagggggaaaaacctgagtggaaacgcttcatagaggagagattg
ctcatgtactcctttgttaatgacaagttcatgctcccagatgatccactcgggagacat
ggacctacattggaaaactttctgctcaagactccccgggctactaagaaactcccctgc
ccctatggtaagaaatgcacctacgggatcaagtgtaagttcagccacccagaacgtgcc
aagcagtcccaacgttccttggcggatgagttgcgtgagaaagccaaaatgccctctccc
atgaaaccgtccttggcaggcccgaacccttcccatggagcctctctggaggaagtgatg
gagcaaaaactcacgctcaatcaaagtggatcactcaagaaggcccacaccagtgagaat
atgctggtggtgaagaacacaccacagtctacttcaagaaagtccccttcaaagcgagat
cgctccagccagtactccacaacaaatccagacggcatctctgcttcctttcaggagtac
ccggactcgggcctgggctcatatgaatgccacggcgagcaccagtgtggaggagagcaa
aggaagtccaagaatccttctaatggaaggttccgatatcctccgacttgcagccagtcc
ttaaaccaatccaatttacagtccaatccaggttaccatccccatcacatgagtatagct
gcatcccaaagcccaaacaacatgccatactctttccctcaatatcactcctatggagga
gcaccttacccaccagggaactttgcccagtatagtgtaccccatgagtaccaccacaga
agcatgcctcctcctcaaagtggttactggtctgagccatactttggccacgtgcctcaa
ggacctgtgcagggtgacggcactccttggacccatccattaccggagaaggagcaggtg
aggaagaagctgcgagccgtttttaatgcccgtcttgtggacagagcaatggagatgttc
ccaaacctaatggaccctcagaaactggccgtggagatcatcaacctgcagtcatatgag
ggggttttatga
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